Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl06g01402 | ATGCCAGCAGCAGTCTACTCCCTCTGCTTCTCTCACAACAACTCACTACCAATCCAAAACACGCCAACAAACAATCTCTCAACAAAACCCAAAACCCTCCTCCAAAAGCTCCCAATCTCCTCAGACCAATTCAAGGAAAAAATCTTATGCCTTGAGATAATGGGTGTAGACTCAGGAAGAGCACTTTCCCTCAACCCATCTCTCCACACAACCACCCTTGACACCATTCACTCCATCATCTCTTTCCTACGATCCAAAGGCATCCATCAAAAGGATTTAGGCAGGATCTTTGGTATGTGCCCCAAAATCCTCACATCCAACATCAAACAAGACCTCACTCCTGTCTTTCATTTCCTATCCCAAGACCTAACTGTCCCATCTCACAACTTCAGGAAGGTTGTCAACAAATGTCCTAGATTACTGGCTTCTAGTGTAAGAGACCAGCTTAAACCAGCCCTCTTTTATCTTCAGAGACTTGGGTTCAAGGACATGGATGCTTTGGCTTATAGGGACTCGGTTTTGCTGGTGTCTAATGTGGAGAATACTCTAATTCCTAAGCTGGATTACTTGGTGAGCTTGGGGTACTCGCGTGAGGATGCTGTGGGGATGGTGGTGAGGTGCCCAGGGCTGTTCACTTTCAGTGTGGAGAACAATTTCAAGCCCAAGTTTGGGTACTTTGTTGGGGAGATGGAGGGGAGGTTGGAGGAGTTGAAGGAATTTCCTCAGTACTTTGCATTTAGTTTGGAGAAGAGGATAAAGCCTAGGCACATGGAGGTTATGAAGAGTGGGGTGAAGGTAGCTTTGCCACTAATGCTCAAGAGCACTGATGAGGAGTTTAGGGAGTTGATGAGGCATGGGGGTGGATGA | 867 | 0.466 | MPAAVYSLCFSHNNSLPIQNTPTNNLSTKPKTLLQKLPISSDQFKEKILCLEIMGVDSGRALSLNPSLHTTTLDTIHSIISFLRSKGIHQKDLGRIFGMCPKILTSNIKQDLTPVFHFLSQDLTVPSHNFRKVVNKCPRLLASSVRDQLKPALFYLQRLGFKDMDALAYRDSVLLVSNVENTLIPKLDYLVSLGYSREDAVGMVVRCPGLFTFSVENNFKPKFGYFVGEMEGRLEELKEFPQYFAFSLEKRIKPRHMEVMKSGVKVALPLMLKSTDEEFRELMRHGGG* | 289 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl06g01402 | 288 | PANTHER | CGI-12 PROTEIN-RELATED | 186 | 282 | IPR003690 | GO:0003690|GO:0006355 | |
Eupl06g01402 | 288 | FunFam | Transcription termination factor MTEF1, chloroplastic | 119 | 286 | - | - | |
Eupl06g01402 | 288 | Pfam | mTERF | 73 | 165 | IPR003690 | GO:0003690|GO:0006355 | |
Eupl06g01402 | 288 | Pfam | mTERF | 174 | 279 | IPR003690 | GO:0003690|GO:0006355 | |
Eupl06g01402 | 288 | SMART | mt_12 | 59 | 89 | IPR003690 | GO:0003690|GO:0006355 | |
Eupl06g01402 | 288 | SMART | mt_12 | 201 | 233 | IPR003690 | GO:0003690|GO:0006355 | |
Eupl06g01402 | 288 | SMART | mt_12 | 94 | 126 | IPR003690 | GO:0003690|GO:0006355 | |
Eupl06g01402 | 288 | SMART | mt_12 | 234 | 265 | IPR003690 | GO:0003690|GO:0006355 | |
Eupl06g01402 | 288 | SMART | mt_12 | 165 | 196 | IPR003690 | GO:0003690|GO:0006355 | |
Eupl06g01402 | 288 | SMART | mt_12 | 131 | 162 | IPR003690 | GO:0003690|GO:0006355 | |
Eupl06g01402 | 288 | Gene3D | Transcription termination factor 3, mitochondrial | 121 | 285 | IPR038538 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl06g01402 | Eupl-Chr6 | 24592388 | 24593413 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | mTERF | Eupl06g01402 | mTERF | 4.9e-27 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl06g01402 | K15031 | - | nnu:104610235 | 440.269 |