Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01389 ATGGAGGCGGACGAGATTCAAACGCAGGAGTGTAAGCTGAGGAGGGTCGTTAATGGTAGAAGAGATTCCAATAAAATAGGGCAAAAAGTAAGTCAACAATACCAATATGAAGATGAAGATGGAGAAGGCAAAGGAGGAAATGGTGGTGGAATTGAAGTTGGTCGCCTTCGTGGCGGGTGGCCCTCGTCGAGGATTTATAGGGTTTCTCGAGCATCTGGAGGGAAAGATCGCCACAGCAAGGTTATAACGGCGAAAGGGCTTAGAGATCGCAGGGTTCGTCTCTCAGTTTCCACAGCTATACAGTTTTATGACCTTCAGGACCGTCTAGGTTACGATCAGCCTAGCAAAGCGGTGGAGTGGCTCATAAGAGCTGCAGCTGATGCTATCGCCGAGCTGCCTTCACTTAACTGTCCGTTTCCTGATACACCAAAACAACCAAGCGACGAAAAGCTCAGCGCGTCTGAGCATGGATTCGAACCTGCCGAGGTTGAGTTCGAGACTGATCCCTCCTATCAGCAGCACCAACAGCACATTTCCTTGACGAAATCCGCTTGCAGCAGCACTTCGGAGACGAGCAAGGGCTCGGTTTTATCTCTCTCCCGATCCGAAATTCGCGTTAAAGCCAGAGAGCGCGCTAGGGAAAGAGCAGCAAAAGAGAAGGAGAAAGAGAAGGAAGAGTCTCATGTTGCCAACCAACCGAATATAAACCCTAATTCCCAGAGCTCTTCTTTCACTGAACTTCTCACTGGTGGTGCTAACAACAATGGCAACCTTGGTAGCACTAATTTCGTTCTCAGGTCAACCCGGCAAATGCCTTCCACCACCCCAATAGATTACTTCAGTCCGGGGATTTTTGGGCCAGCGTCATCAAGAACCCATCACTCATCTGGGTTTTCCGGTCAAACCCATTTCCTTAACTCTCTGTCACCCCACACAATGATGGTGCCACAGCCTCATTTCATGGGCGATCATCATCCGGAGCTACAGCAGTTCTCGTTCCTGCAAGATCATCTCATACCAGTTGTCTCTGCGGCTGGGAGCGATTACAATCTCAATTTCACCATATCTTCCGGCCTTTCTGGTTTCAATCGGGGGACCCTTCAGTCCAATTCACCAACTCCGTTGCCTCATCTTCAGAGGCTTTCTTCAACTGTAGACGGACCAAACATGCCGTTCTTTATCGGGAATGGGGCTTCCGCTGCTGCACCTGCGGATACACAGTTCCCAGCTGGGTTTGATGGCCGCCTGCATCTCTGTTACGGCGATGGGGGCAGGCATTTAGACCCGAAGGGAAAGGGGAGAAGCTAA 1308 0.5038 MEADEIQTQECKLRRVVNGRRDSNKIGQKVSQQYQYEDEDGEGKGGNGGGIEVGRLRGGWPSSRIYRVSRASGGKDRHSKVITAKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAVEWLIRAAADAIAELPSLNCPFPDTPKQPSDEKLSASEHGFEPAEVEFETDPSYQQHQQHISLTKSACSSTSETSKGSVLSLSRSEIRVKARERARERAAKEKEKEKEESHVANQPNINPNSQSSSFTELLTGGANNNGNLGSTNFVLRSTRQMPSTTPIDYFSPGIFGPASSRTHHSSGFSGQTHFLNSLSPHTMMVPQPHFMGDHHPELQQFSFLQDHLIPVVSAAGSDYNLNFTISSGLSGFNRGTLQSNSPTPLPHLQRLSSTVDGPNMPFFIGNGASAAAPADTQFPAGFDGRLHLCYGDGGRHLDPKGKGRS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01389 435 MobiDBLite consensus disorder prediction 138 157 - -
Eupl06g01389 435 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 364 IPR005333 GO:0003700
Eupl06g01389 435 Coils Coil 206 226 - -
Eupl06g01389 435 ProSiteProfiles R domain profile. 202 220 IPR017888 -
Eupl06g01389 435 MobiDBLite consensus disorder prediction 169 199 - -
Eupl06g01389 435 MobiDBLite consensus disorder prediction 22 54 - -
Eupl06g01389 435 Pfam TCP family transcription factor 73 222 IPR017887 -
Eupl06g01389 435 MobiDBLite consensus disorder prediction 203 229 - -
Eupl06g01389 435 ProSiteProfiles TCP domain profile. 74 132 IPR017887 -
Eupl06g01389 435 MobiDBLite consensus disorder prediction 169 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01389 Eupl-Chr6 24387038 24388345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01389 52 434 TCP Transcription Factor Family AT4G18390 43.237 1.38e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl06g01389 TCP 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01389 - - nnu:104610792 528.094