Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01371 ATGGAAAAGACTATTCTACCCTTGGCTATGAGGAGGAATTCCAATTTAGAGCTCCGTCTTCTTCCTCCAGCAGCTTCTCTCCCGTCTATGGATTCCGGCCGCGACTCCATGGCCCATGGATCGCCTGGAAACCCACAACAACTCACCATTTTCTACGATGGACGGGTGTGCGTTTGCAATGTAACCGAACTTCAGGCTAGAGCCATCATATGCCTTGCAAGGCAAGAAATGGATGAAAGGACAAATACCCCTGATTCAGGGCATGCATCGCCATCTTTGCAATCTCAATTCCACAGCCCTACTGGTATTTCGTTGAAGAAATCTCTACAACGGTTCCTCCAAAAACGAAAGAACAGGATCCAAGCAACTTCCCCTTATTAG 381 0.4777 MEKTILPLAMRRNSNLELRLLPPAASLPSMDSGRDSMAHGSPGNPQQLTIFYDGRVCVCNVTELQARAIICLARQEMDERTNTPDSGHASPSLQSQFHSPTGISLKKSLQRFLQKRKNRIQATSPY* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01371 126 MobiDBLite consensus disorder prediction 79 100 - -
Eupl06g01371 126 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 32 126 IPR040390 -
Eupl06g01371 126 ProSiteProfiles Tify domain profile. 41 75 IPR010399 -
Eupl06g01371 126 Pfam tify domain 44 73 IPR010399 -
Eupl06g01371 126 SMART tify_2 41 75 IPR010399 -
Eupl06g01371 126 MobiDBLite consensus disorder prediction 84 100 - -
Eupl06g01371 126 Pfam Jas motif 106 126 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01371 Eupl-Chr6 23850172 23852034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01371 8 126 Tify Gene Family AT1G30135 43.511 1.61e-24 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Eupl06g01371 tify 6.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01371 - - ming:122060137 138.272