Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01364 ATGGAGTCCTGCAACTGCATTGAGCCCCAATGGCCGGCTGATGAACTGTTGATGAAATACCAGTACATTTCAGACTTCTTTATTGCATTTGCTTATTTTTCCATCCCTCTCGAACTAATATACTTTGTAAAGAAATCTGCAGTTTTCCCATATAGATGGGTGCTTGTGCAATTTGGTGCTTTCATCGTTCTTTGTGGAGCCACACACCTTATTAGCTTATGGACTTTCAGCACGCATTCGAGAATTGTGGTAGTTGTAATGACCACAGCAAAGGTTTTGACTGCTGTCGTGTCATGTGCAACGGCCCTTATGCTTGTGCACATAATTCCTGATTTGTTGAGTGTGAAAACCAGGGAGTTATTTTTGAAAAACAAGGCTGCAGAGCTTGATCGGGAGATGGGCCTGATTCGTACGCAGGAAGAAACAGGTCAGCATGTTAGAATGCTAACTCATGAGATTAGAAGTACTCTTGACAGACATACTATATTAAAGACCACTCTTGTTGAACTGGGTAGAATGTTGGCATTGGAGGAGTGTGCACTCTGGATGCCAACACGTACTGGTTTGGAGCTTCAACTTTCCTACACTCTACGACACCAAAACCCTGTTGGAGTTACTGTACCTGTTCAGCTTCCCGTGATCAATCAAGTTTTTAGTAGCAACTGTGCAGTTAAAATATCACCAAATTGTCCAGTGGCAAGACTTCGAACTCTTGCAGGAAAATATATGCCCGGGGAGGTTGTTGCTGTGCGTGTCCCACTTTTACATCTCTCAAATTTTCAAATTAATGATTGGCCAGAGCTTTCTACAAAACGCTATGCATTGATGGTTTTGATGCTTCCTTCAGACAGTGCGAGGCAATGGCACGTCCATGAGTTAGAGCTTGTTGAAGTGGTCGCTGATCAGGTGGCAGTTGCTCTTTCTCATGCTGCAATTTTAGAAGAATCTACGAGGGCAAGGGATCTGCTTATGGAACAAAATGTTGCATTGGATCTGGCGAGAAGAGAAGCAGAAACCATCCGTGCTCGCAATGAATTTTTGGCAGTCATGAACCATGAGATGAGAAACCCTATGCATGCGGTTATTGCACTCTCTTCCTTATTGCAGGAAACTGAACTGACACCTAAACAGCGCCTGATGGTGGAAACTGTCCTAAAGAGCAGTAACCTCTTAGCAACACTTATTAATGATGTTTTAGATCTTTCAAGACTTGAAGAAGGAAGCCTCGAACTTGACCTTGGGACATTTAACCTTCATGCGGTATTCAGAGAGATCTTTAACTTGATCAAGCCCGTTGCATCTGTCAAAAAGTTGTTGGTATCATTAAGTTTGGCTCCGGATTTGCCTGAGTACGCTGTTGGTGATGAAAAACGTCTTATGCAAACCATATTGAATGTTGCCGGTAATTCTGTGAAGTTCTCGAAAGAGGGAAGCATCTCAATCACTGCTTGTATTGCAAAATTAGAATCTTTAAGAGATGCTTGGGCTCCTGACTTTTTTCCAGTGCCAAGTGATAATCATTTTTATTTGCGAGTACAGGTAAAGGATTCGGGATTAGGAATCAGCCCCCAAGACATTCCTAGTTTATTTAATAAATTCGCACAAAGTCATTCACTAGCAAGTAGAAATTCTGGTGGCACAGGACTTGGGCTTGCAATTTGTAAGAGGTTTGTAAATCTCATGGAGGGGCATATTTGGATTGAAAGTGAAGGTCTTGGCCAAGGGTCTACTGCTATATTCATTGTAAAACTTGGAATTGCAGAGCATTCAAGTGAGTCTGAGCACCGTTTTGTACCTAAAGTTCAAGCAAATCATGGCCAGGCAAATTTTCCAGGACTCAAAGTTCTTGTTATGGATGACAATGGGGTTAGCAGGATGGCGACAAAGGGACTTCTCATGCATCTGGGATGTGATGTAACAGTTGTTAGCTCAGGAGAAGAGTGTTTGCAGATTGTTTCTCAGGAACACAAAGTGCTAATCATGGATGTGTGCATCCCTGGAATGATTGGGTATGAAGTGGTAGTCCAAATACATGAAAGATTCTCCACACGTCATGAGAGGCCGCTGCTTGTAGCACTTACCGGGTATACAGATAGGGTTACAAAAGAGAACTGCTTGAGGGTCGGTATGGATGGAGTGATACTGAAACCTGTTTCACTTGAGAAGATGAGGAGTGTTTTGTCAGAGTTGTTAGAACATGGGACTCTGTGA 2211 0.4274 MESCNCIEPQWPADELLMKYQYISDFFIAFAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLISLWTFSTHSRIVVVVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGQHVRMLTHEIRSTLDRHTILKTTLVELGRMLALEECALWMPTRTGLELQLSYTLRHQNPVGVTVPVQLPVINQVFSSNCAVKISPNCPVARLRTLAGKYMPGEVVAVRVPLLHLSNFQINDWPELSTKRYALMVLMLPSDSARQWHVHELELVEVVADQVAVALSHAAILEESTRARDLLMEQNVALDLARREAETIRARNEFLAVMNHEMRNPMHAVIALSSLLQETELTPKQRLMVETVLKSSNLLATLINDVLDLSRLEEGSLELDLGTFNLHAVFREIFNLIKPVASVKKLLVSLSLAPDLPEYAVGDEKRLMQTILNVAGNSVKFSKEGSISITACIAKLESLRDAWAPDFFPVPSDNHFYLRVQVKDSGLGISPQDIPSLFNKFAQSHSLASRNSGGTGLGLAICKRFVNLMEGHIWIESEGLGQGSTAIFIVKLGIAEHSSESEHRFVPKVQANHGQANFPGLKVLVMDDNGVSRMATKGLLMHLGCDVTVVSSGEECLQIVSQEHKVLIMDVCIPGMIGYEVVVQIHERFSTRHERPLLVALTGYTDRVTKENCLRVGMDGVILKPVSLEKMRSVLSELLEHGTL* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01364 736 Gene3D - 136 321 IPR029016 -
Eupl06g01364 736 Pfam GAF domain 158 307 IPR003018 GO:0005515
Eupl06g01364 736 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 396 584 IPR036890 -
Eupl06g01364 736 FunFam Ethylene receptor 1 310 405 - -
Eupl06g01364 736 Gene3D - 331 407 - -
Eupl06g01364 736 CDD REC_ETR-like 613 727 - -
Eupl06g01364 736 Gene3D - 408 591 IPR036890 -
Eupl06g01364 736 Pfam Response regulator receiver domain 615 726 IPR001789 GO:0000160
Eupl06g01364 736 SMART REC_2 613 727 IPR001789 GO:0000160
Eupl06g01364 736 PRINTS Bacterial sensor protein C-terminal signature 510 524 IPR004358 GO:0016310|GO:0016772
Eupl06g01364 736 PRINTS Bacterial sensor protein C-terminal signature 545 563 IPR004358 GO:0016310|GO:0016772
Eupl06g01364 736 PRINTS Bacterial sensor protein C-terminal signature 528 538 IPR004358 GO:0016310|GO:0016772
Eupl06g01364 736 SMART HKATPase_4 454 588 IPR003594 -
Eupl06g01364 736 Gene3D - 607 734 - -
Eupl06g01364 736 SUPERFAMILY CheY-like 609 732 IPR011006 -
Eupl06g01364 736 ProSiteProfiles Histidine kinase domain profile. 349 588 IPR005467 -
Eupl06g01364 736 FunFam Ethylene response sensor 136 308 - -
Eupl06g01364 736 CDD HisKA 340 403 IPR003661 GO:0000155|GO:0007165
Eupl06g01364 736 ProSiteProfiles Response regulatory domain profile. 614 731 IPR001789 GO:0000160
Eupl06g01364 736 SMART gaf_1 158 317 IPR003018 GO:0005515
Eupl06g01364 736 FunFam Ethylene receptor 607 736 - -
Eupl06g01364 736 Pfam His Kinase A (phospho-acceptor) domain 343 407 IPR003661 GO:0000155|GO:0007165
Eupl06g01364 736 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 332 408 IPR036097 GO:0000155|GO:0007165
Eupl06g01364 736 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 733 - -
Eupl06g01364 736 FunFam Ethylene receptor 1 407 589 - -
Eupl06g01364 736 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 454 584 IPR003594 -
Eupl06g01364 736 PIRSF Ethylen_sen_hybr_HK 1 736 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Eupl06g01364 736 SMART HisKA_10 342 407 IPR003661 GO:0000155|GO:0007165
Eupl06g01364 736 SUPERFAMILY GAF domain-like 161 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01364 Eupl-Chr6 23684207 23705093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01364 1 732 Miscellaneous Gene Families AT1G66340 81.199 0.0 1231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl06g01364 GAF 4.9e-13 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01364 K14509 - cit:102578063 1244.18