Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01361 ATGGCGGACGAGCCTTCTCTTACTCGCTGGTCATTCCAGGATTTTAAGATGTTTTATGATGCCAAGTTTGGGAGAAAAAAGGAGCCCGAGCGGCAAGACGCTAAGGCGCCTGATCATACTGCCGATAGAGCAGTTTCCAATGGGAATGGAAACGTCAAAAACACATCTGACATGGCTATTTACGAGCAGTTCCGGAGACAGGAGACAAGGGGTCCTGCACAACTTAATGGAGCTCCTTCTGAGAATCCGCAGAAGTCGCTGCTTCCTGCTTTTGAGTCTGCAGAAATGCGCACCTTAGCAGAGAGTTTATGTAGGGATATCATTCGTGGGAGTCCAGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAGAATGCAAAACGTCTTCTTAAGGAAGCAGTTGTCATGCCAATAAAGTATCCTAAGTACTTTACTGGTCTTCTATCACCATGGAAAGGTATTCTACTTTTTGGCCCTCCAGGAACAGGGAAGACTATGCTTGCCAAGGCTGTTGCAACTGAGTGCAGGACTACCTTCTTCAACATTTCAGCATCATCTGTTGTTAGTAAATGGCGTGGTGATTCAGAGAAGTTAGTGAAAGTGTTATTCGAACTTGCTAGGCATCATGCCCCATCAACCATATTTCTTGATGAGATTGATGCAATCATTAGTCAACGAGGTGAAGGGCGCAGTGAGCATGAAGCAAGTCGGCGTTTAAAAACTGAGCTACTTGTACAGATGGATGGTCTGACTCGGACAGATGAACTTGTTTTTGTATTGGCGGCAACAAATCTTCCCTGGGAGCTGGATGCAGCAATGCTCCGGCGTCTTGAGAAGCGGATCCTTGTACCTCTTCCAGAACCAGAAGCAAGAAGAGCAATGTTTGAGGAACTCTTGCCATCTGTGCCTGGTGAAGAGAAGCTCCCACATGACTTGCTGGTTGAGAGGACAGAAGGCTATTCAGGTTCAGATATTCGGTTAGTGTGCAAAGAGGCCGCCATGCAGCCCCTGAGACGTGTAATGGCGCTTCTAGAAGACAAGCAAGAGGTGGTGCCTGAGGAGGAGTTGCCAAAGGTTGGTCCAATCAGACATGAAGATATTGAAGTGGCTTTGACGAACACAAGACCATCGGCTCATCTCCATGCCCACCGTTATGATAAGTTTAACACCGACTATGGTAGCCAAATTCTCCAATGA 1194 0.4707 MADEPSLTRWSFQDFKMFYDAKFGRKKEPERQDAKAPDHTADRAVSNGNGNVKNTSDMAIYEQFRRQETRGPAQLNGAPSENPQKSLLPAFESAEMRTLAESLCRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECRTTFFNISASSVVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEASRRLKTELLVQMDGLTRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSVPGEEKLPHDLLVERTEGYSGSDIRLVCKEAAMQPLRRVMALLEDKQEVVPEEELPKVGPIRHEDIEVALTNTRPSAHLHAHRYDKFNTDYGSQILQ* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01361 397 PANTHER AAA DOMAIN-CONTAINING 55 393 - -
Eupl06g01361 397 FunFam Katanin p60 ATPase-containing subunit A-like 2 112 296 - -
Eupl06g01361 397 SMART AAA_5 149 286 IPR003593 GO:0016887
Eupl06g01361 397 MobiDBLite consensus disorder prediction 23 40 - -
Eupl06g01361 397 Pfam AAA+ lid domain 312 346 IPR041569 -
Eupl06g01361 397 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 376 IPR027417 -
Eupl06g01361 397 FunFam Katanin p60 ATPase-containing subunit A-like 2 285 373 - -
Eupl06g01361 397 Pfam ATPase family associated with various cellular activities (AAA) 153 283 IPR003959 GO:0005524|GO:0016887
Eupl06g01361 397 Gene3D - 112 387 IPR027417 -
Eupl06g01361 397 CDD RecA-like_VPS4-like 119 282 - -
Eupl06g01361 397 MobiDBLite consensus disorder prediction 23 56 - -
Eupl06g01361 397 Gene3D - 285 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01361 Eupl-Chr6 23603756 23619801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01361 91 344 Calmodulin-binding Proteins AT3G56690 38.911 5.28e-46 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01361 K07767 - nnu:104613493 692.575