Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01342 ATGAACGAAGGAGAAGAGAAGAAACATTACGGAACATTTCAAGGCGTTCCGAGCCATTCTCAGCCGTCTATTGGATTCCCTCAGCCGATCCCACCGCCCGGCGCCACTGCCGCTTCTGCTTCTCCTTACTACTCTCAGGGCTATCAAGCCGTTACAGGTTATGCAGTGGTTGAAGGAAGACCTGTAAGAGAACCTCGTCTTCCTTGTTGTGGTATCGGACTTGGCTGGATTCTGTTTATAACTGGTTTCTTTCTTGCTGCCATTCCTTGGTATGTTGGAGCTTTCCTTATGCTCTGTGTCAGAGTAGATTACAGAGAGAAACCTGGGCTTATCTTATGCACCATTGCTGTAAGCATTCCTTTTCCATTATTCCATTATTCCATTTTAATGTATCAAAAGATGTGCTCTTATTATCTTGTGCTTGTGTAG 429 0.4499 MNEGEEKKHYGTFQGVPSHSQPSIGFPQPIPPPGATAASASPYYSQGYQAVTGYAVVEGRPVREPRLPCCGIGLGWILFITGFFLAAIPWYVGAFLMLCVRVDYREKPGLILCTIAVSIPFPLFHYSILMYQKMCSYYLVLV* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01342 142 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 5 119 IPR044804 -
Eupl06g01342 142 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01342 Eupl-Chr6 23146964 23164794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01342 5 116 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.133 4.91e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01342 - - nnu:104610275 157.147