Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01331 ATGGAAAAAATTTTTATATATGTTCAAGGGAAGCATCGAAAGTTGATGCTCGCATTATCAAAAGTTGGCACAGAATTAACTGATGTGCCTTCGCTTGAAAATCTTGTAGAATTGAGGGTGTTAGATCTCCGCAACACTGGCATCACAGAATTTCCTCAAGGCATGGGAAGGTTGGTCAACCTCAGACGCCTTGCTCTCTCTTACACTCACTGCCCAAGAATGCTTCCGAGTGGGTTACTATCCATGCTTTCCTTTCTCGAAGACCTCGAGAAACTCATGAACTTGACACATTTAGAAATTTTGTCTGCTAGGTTCTCCGACATACATACATTTAATAAGTATGCCAGGTCTGAGCATGTGCAACAGTTGAAGACATTTCGTTTGTCCGTAGGGAATGATGGCTGCTACACTTGTGAGCATTCAGCGACGGAGGAGAAATTTGTATCAGTACACAGAGTCAATCTCATTGACGAAAATAACTCCCTTGCGCTCCCTCACAACACCCAAGATTTCTATATTTCTAATTGCAACGATATCACTAGCTTATCGGAATTGTATTGCTTAAAGAATATGAGGGATTTGAAAATTTGTAACCTCCGTGGTTGCAAAGGAATAAAGTGCATCTTGTTGGTTGACGATGAAGAACACCTCCAAAACCTTGAAAAAATTGAGGTTCAATGTTGTTGGGAAATGGAGGAGATAATAGCAGAAGAAGAGATGGAGGAAGGGAACAACAAAACCATCACACTTCCAAGGTTAAAGGAGTTGTATTTGGAGGACCTACCGAAATTAAAGAGCATTTGGAAGGGGTTAATGATTTGTGAGTCTCTAGAAACTATTTGTGTAAATGATTGTAAAGAGCTGAAAAGGCTCCCTCTCACTATGGAAATGGAAGATAGACGACCACCACCACCACAAATCTTAGGAAGGGACGAGTGGTGGGATTCGCTGGAGTGGGACCATCACAACCACAAAGCCCTCCTTCAACCCTTCTTCATATCTATGTTTGATTACAGGAATGGGCCCTCGGAAACTAATGCTGCCCTTGAGTTCGCTGTAAATTCTCTTGAGGTTCAAGTCAACGACGCAAAAGCGAATCCCCCTCACTTTATATCTGGACTAATACGTAACAACAGCTCGATCACAAGGCATCGCATTCATGGGCTGTACTGCTTATATAATGTTGATATTCTGGCGGCTGCTCGACTTGTGGAAGGAGACAACACACCATCTTTCTGA 1239 0.4237 MEKIFIYVQGKHRKLMLALSKVGTELTDVPSLENLVELRVLDLRNTGITEFPQGMGRLVNLRRLALSYTHCPRMLPSGLLSMLSFLEDLEKLMNLTHLEILSARFSDIHTFNKYARSEHVQQLKTFRLSVGNDGCYTCEHSATEEKFVSVHRVNLIDENNSLALPHNTQDFYISNCNDITSLSELYCLKNMRDLKICNLRGCKGIKCILLVDDEEHLQNLEKIEVQCCWEMEEIIAEEEMEEGNNKTITLPRLKELYLEDLPKLKSIWKGLMICESLETICVNDCKELKRLPLTMEMEDRRPPPPQILGRDEWWDSLEWDHHNHKALLQPFFISMFDYRNGPSETNAALEFAVNSLEVQVNDAKANPPHFISGLIRNNSSITRHRIHGLYCLYNVDILAAARLVEGDNTPSF* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01331 412 Gene3D Ribonuclease Inhibitor 8 300 IPR032675 -
Eupl06g01331 412 SUPERFAMILY L domain-like 23 292 - -
Eupl06g01331 412 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 26 302 - -
Eupl06g01331 412 Coils Coil 346 366 - -
Eupl06g01331 412 SUPERFAMILY Galactose-binding domain-like 348 409 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01331 Eupl-Chr6 22969595 22979903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01331 335 409 Polysaccharide Lyase AT1G09910 43.750 8.10e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01331 K13459 - bvg:104899618 179.104