Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01323 ATGCAGAGTGACCAACGATTTAATCCTAGAAAGGAGGTGCCCCCTATTTCATATCAAGTAGATGGTGGATATATATGTAGTGCCCCTGTTGCACCCGCCTTAGGCGTGACTCTACCACCAAGTGCAAAGTACTCGAGACCCTTTCATGGGGTTGAACTCCAACCATCTGGAGTCTGTCCTCAGAATTTCATAATCTTTGACCAGACAGATAACAGAAGCCGGGTCATGTTCCACCCTGCACTTGCCCACAAGTTCAATCGCCCTGGTTTTGATATCCATGCAACGTTTGTCCAAGATAATGGCGGGAGGAAAGATACAGGTACAGAGAATAGAGAATCTTCCTCTCCTCTGAAAGAGGACACAGAAGACATTGATGCTTTGTTGAGTTTGGAAGAAGAACTAGAAGACGACGAGGAAGAGGTTAGCACTGCCCGGACTCTCGGTAGCTGTGGAAGTGGTTCCCCTGACTCATGTTCAACTTATGGTTCCAAACCCAGCAAGCAGAGGTTGTGTTCTTCCCCTATTCAAAAGTCATCCGGCTGCAGCACCAGCAGCTGCAACAGTGAAAGGAAGCGACAGAGAACGAAGAAAATGGTAAAGACACTACGGGGAATTGTACCTGGCGCTGACCAGATGAATACTGCTGCTGTTCTTGATGAAGCCGTTAAGTACCTCAAGTCTCTGAAAGTGGAAGTGAAGAAGCTTGGAATAGGGAATTTCAAGAACTGA 729 0.4705 MQSDQRFNPRKEVPPISYQVDGGYICSAPVAPALGVTLPPSAKYSRPFHGVELQPSGVCPQNFIIFDQTDNRSRVMFHPALAHKFNRPGFDIHATFVQDNGGRKDTGTENRESSSPLKEDTEDIDALLSLEEELEDDEEEVSTARTLGSCGSGSPDSCSTYGSKPSKQRLCSSPIQKSSGCSTSSCNSERKRQRTKKMVKTLRGIVPGADQMNTAAVLDEAVKYLKSLKVEVKKLGIGNFKN* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01323 242 MobiDBLite consensus disorder prediction 145 188 - -
Eupl06g01323 242 MobiDBLite consensus disorder prediction 144 195 - -
Eupl06g01323 242 Coils Coil 117 147 - -
Eupl06g01323 242 MobiDBLite consensus disorder prediction 104 121 - -
Eupl06g01323 242 CDD bHLH_AtSAC51_like 184 236 - -
Eupl06g01323 242 SMART finulus 186 234 IPR011598 GO:0046983
Eupl06g01323 242 PANTHER TRANSCRIPTION FACTOR BHLH145 15 238 IPR037546 -
Eupl06g01323 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 235 IPR036638 GO:0046983
Eupl06g01323 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 228 IPR011598 GO:0046983
Eupl06g01323 242 Gene3D - 182 236 IPR036638 GO:0046983
Eupl06g01323 242 MobiDBLite consensus disorder prediction 96 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01323 Eupl-Chr6 22733701 22734429 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01323 38 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 47.748 2.68e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01323 - - nnu:104610514 303.523