Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01317 ATGGGCAGCATTCCTGGCTTAGCATTCTACATCACAGTATGCTGTGTCGCATTTGTTATATCGAAGATAGTTATCTCGGTCCTCCTCTACCGAAGATGGCAAAGAAAGCACAAAGTATTCCAAGATAACATGTCAGGTGGAAAAATGGTGATGTTCAGATCTCCAACAATGCAGTATCTCACCTCTGAAGTGTTCTTGAAGAAGACTATGAGGTTAACCAACAAGGATATTATCGGGTCCGGAGGCTATGGAACGGTGTACAGACTGACAATAGATGATTGCACATCCTTTGCTGTAAAAAGACTAAACAGGGGTTGTGCAGACAGGGATAAAGGATTTGAAAGAGAGCTGAAGGCAATGGGAGACATAAAGCACAGGAACATTGTCACTCTTCATGGATATTACACTGCACCTCACTATAATCTTCTTATATATGATCTTATGCCCAATGGAGGTTTGGATGCATTGCTTCATGGAAGATCAAATGACAAGAAGCCTTTGGATTGGCCTTCAAGATACAAAATAGCGGTAGGTGCTGCACGGGGAATATCATACCTTCATCATGATTGCATTCCTCACATAATCCATAGAGATATTAAATCGAGCAATATACTATTGGATCAAGGTATGGAGGCTCGAGTGTCTGATTTTGGACTGGCCACGTTAATGGAACCAGATAAGACTCATGTTTCGACATTTGTTGCTGGAACTTTTGGTTACTTAGCTCCTGAATATTTTGATACAGGAAGAGCAACAGCAAAAGGGGATGTTTACAGCTTCGGTGTTGTTTTACTTGAGCTTTTAACTGGAAAGAGACCAACTGCTGAAGCATTTATAGAGGAGGGGACTAAGCTGGTGACTTGGGTGAAAGCAGTTGTGGACAAGGAAAGGGAGGAGTATGCAATTGATAGTAGCTTAGGTTGTTGTCCTCTAGATGAAGTTAAGAATGTATTCAATATAGCATTGATGTGCCTTGAAGCAGAGCCCTCTAAGAGACCAAACATGGCTGAGGTTCTCAAAATGCTCGAGCAGATAAAAGCAGATAAACTTGTACAGGATTCTTGA 1065 0.415 MGSIPGLAFYITVCCVAFVISKIVISVLLYRRWQRKHKVFQDNMSGGKMVMFRSPTMQYLTSEVFLKKTMRLTNKDIIGSGGYGTVYRLTIDDCTSFAVKRLNRGCADRDKGFERELKAMGDIKHRNIVTLHGYYTAPHYNLLIYDLMPNGGLDALLHGRSNDKKPLDWPSRYKIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDQGMEARVSDFGLATLMEPDKTHVSTFVAGTFGYLAPEYFDTGRATAKGDVYSFGVVLLELLTGKRPTAEAFIEEGTKLVTWVKAVVDKEREEYAIDSSLGCCPLDEVKNVFNIALMCLEAEPSKRPNMAEVLKMLEQIKADKLVQDS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01317 354 Gene3D Transferase(Phosphotransferase) domain 1 148 353 - -
Eupl06g01317 354 Pfam Protein kinase domain 74 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01317 354 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 148 354 - -
Eupl06g01317 354 SMART serkin_6 72 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01317 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Eupl06g01317 354 SUPERFAMILY Protein kinase-like (PK-like) 49 345 IPR011009 -
Eupl06g01317 354 FunFam Receptor-like serine/threonine-protein kinase 43 147 - -
Eupl06g01317 354 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 11 347 - -
Eupl06g01317 354 Gene3D Phosphorylase Kinase; domain 1 33 147 - -
Eupl06g01317 354 ProSiteProfiles Protein kinase domain profile. 72 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01317 354 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Eupl06g01317 354 PIRSF TyrPK_CSF1-R 150 353 - -
Eupl06g01317 354 PIRSF TyrPK_CSF1-R 7 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01317 Eupl-Chr6 22557604 22568552 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01317 28 344 Receptor kinase-like Gene Family AT2G35620 46.541 2.31e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Eupl06g01317 Pkinase 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01317 - - psom:113289960 620.542