Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01315 ATGGCTGCTTCAACAATGGCTCTCTCCTCTCCTTCTCTAGCCGGAAAGGCAGTGAAGCTCGCCCCTTCCGCCTCCGAGCTTCTCGGTGAAGGGAGGATCACCATGAGAAAGACAGCTGGCAGGCCTAAGCCTATCTCATCCGGTAGCCCATGGTACGGTCCTGACCGAGTTAAGTACTTGGGACCCTTCTCTGGTGAGCCACCATCCTACCTAACTGGTGAATTCCCTGGTGATTACGGATGGGACACAGCTGGTCTCTCTGCTGACCCAGAGACCTTCGCCAAGAACCGTGAGCTGGAGGTGATTCACAGCAGATGGGCCATGCTTGGAGCCCTTGGTTGCGTCTTCCCTGAATTGCTTTCTCGAAATGGTGTGAAGTTTGGTGAGGCTGTTTGGTTCAAGGCTGGTGCACAGATCTTCAGTGAGGGTGGACTTGACTATCTTGGTAACCCTAGCTTGGTGCATGCTCAGAGCATTCTAGCTATCTGGGCTACACAAGTTATCTTGATGGGTGCTGTTGAGGGTTACCGTATTGCTGGTGGGCCACTTGGTGAGGTGACTGACCCACTTTACCCCGGTGGAAGCTTCGACCCACTTGGGTTAGCTGATGATCCTGAGGCTTTTGCTGAGCTGAAGGTCAAGGAGATTAAGAATGGGAGACTTGCTATGTTCTCCATGTTTGGGTTCTTTGTTCAGGCAATTGTGACTGGTAAGGGACCTTTGGAGAACCTGGCCGACCACCTTGCCGACCCAGTTAACAACAATGCTTGGGCCTATGCTACCAACTTTGTTCCTGGCAAATGA 804 0.5249 MAASTMALSSPSLAGKAVKLAPSASELLGEGRITMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01315 267 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
Eupl06g01315 267 SUPERFAMILY Chlorophyll a-b binding protein 50 264 - -
Eupl06g01315 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 267 IPR001344 GO:0009765|GO:0016020
Eupl06g01315 267 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
Eupl06g01315 267 FunFam Chlorophyll a-b binding protein, chloroplastic 58 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01315 Eupl-Chr6 22532065 22533805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01315 1 267 Chloroplast and Mitochondria Gene Families AT1G29930 89.552 7.98e-177 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01315 K08912 - jre:109014159 538.88