Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01314 ATGGCCGCTTCAACAATGGCTCTCTCCTCTCCTTCTCTAGCTGGAAAGGCAGTGAAGCTCGCCCCTTCCGCCTCCGAGCTTCTCGGTGAAGGGAGGATCACCATGAGAAAGACAGTAGGCAGGCCTAAGCCTATCTCATCCGGTAGCCCATGGTACGGTCCTGACCGAGTTAAGTACTTGGGCCCCTTCTCTGGTGAGCCACCATCCTACCTAACTGGTGAATTCCCTGGTGATTACGGATGGGACACAGCTGGTCTCTCTGCTGACCCAGAGACCTTCGCCAAGAACCGTGAGCTGGAGGTGATTCACAGCAGATGGGCCATGCTTGGAGCCCTTGGTTGCGTCTTCCCTGAATTGCTTTCTCGAAATGGTGTGAAGTTTGGTGAGGCTGTTTGGTTCAAGGCTGGTGCACAGATCTTCAGTGAGGGTGGACTTGACTATCTTGGTAACCCTAGCTTGGTGCATGCTCAGAGCATTCTAGCTATCTGGGCTACACAAGTTATCTTGATGGGTGCTGTTGAGGGTTACCGTATTGCTGGTGGGCCACTTGGTGAGGTGACTGACCCACTTTACCCCGGTGGAAGCTTCGACCCACTTGGGTTAGCTGAGGATCCTGAGGCTTTTGCTGAGCTGAAGGTCAAGGAGATTAAGAATGGGAGACTTGCCATGTTCTCCATGTTTGGGTTCTTTGTTCAGGCAATTGTGACTGGTAAGGGACCTTTGGAGAACCTAGCTGACCACCTTGCCGACCCTGTTAACAACAATGCTTGGGCCTATGCTACCAACTTTGTTCCTGGCAAGTGA 804 0.5261 MAASTMALSSPSLAGKAVKLAPSASELLGEGRITMRKTVGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01314 267 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
Eupl06g01314 267 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
Eupl06g01314 267 SUPERFAMILY Chlorophyll a-b binding protein 50 264 - -
Eupl06g01314 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 267 IPR001344 GO:0009765|GO:0016020
Eupl06g01314 267 FunFam Chlorophyll a-b binding protein, chloroplastic 58 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01314 Eupl-Chr6 22519956 22521322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01314 1 267 Chloroplast and Mitochondria Gene Families AT1G29930 89.925 1.10e-177 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01314 K08912 - nnu:104587699 537.339