Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01310 ATGTCATCTGAAAGTTCTCTGAATACTGAATTGTCGAAAAAGACATTCTTATTTGGTTTGAAACTATGGGTTTTGATTGGTATCTGTGTTGGAGCACTTATTGTGTTGGTTCTGTCTATCTTATCTATATGTGTCACGTCTCGGAAAAAATCAAGAAGGACCTTTGAAAAGTTCTCCCATTCCCAAATACCTATCATCTCAAAGGAAATCAAAGTCGATAGGGTTGGGGCTCACAATTTCCATGATCACCGAGAAGGTGTTCTTGTCACAGACCATAGTAAATCAAGTGATAAGGATTCAGAGAAGCTGTTAGTTCATCTGGCTATGAGCAAATCAAGCGAGACAGATAACATCAGCCAGTGCAGCTCGGTTTATCACCACGAGAGAGGCTGTAGTTCACAGTCAGGGGAAGAAGGAAGCTCTGGGACTTTTCGCAAGCAATCCTCTTTGGCAAATGGGCTCGCTTCAGCCTCACCTTTAATTGGCCTGCCTGAGGTCTCACATCTTGGGTGGGGTCACTGGTTTACTCTTAGAGATCTTCAATTTGCGACGAACCGTTTCTCAGCAGAGAATGTACTCGGGGAGGGTGGATATGGGGTTGTTTATAAGGGCCGTCTGGTCAATGGAACTGAGGTGGCTGTGAAGAAACTCCTCAACGATCTGGGACAGGCAGAGAGGGAATTTAGAGTCGAAGTGGAAGCTATAGGTCATGTCCGACATAAAAATCTGGTGCGGCTCTTGGGTTACTGTATAGAAGGAGTTCACAGGATGCTGGTGTATGAATATGTGAACAATGGCAACTTAGAGCAGTGGCTTCATGGAGCTATTCGCCAACATGGATCCCTTAGTTGGGAGGCCCGCATGAAGGTCATTCTTGGTACAGCTAAGGCACTTGCTTATTTGCATGAAGCAATAGAACCAAAAGTTGTTCACCGGGACATAAAATCAAGCAATATCTTGATTGATGATGAGTTTAATGCCAAGGTTTCTGATTTCGGATTGGCCAAGCTCTTGGGTTCAGGAAAAAGTCACCTCACAACCAGAGTGATGGGGACGTTTGGATATGTAGCTCCTGAATATGCAAATACTGGCTTGTTGAATGAGAAGAGCGACATTTACAGTTTTGGTGTCCTCCTGCTAGAAGCAGTTACGGGCAGGGATCCTGTGGACTACAGTCGACCTGCTAATGAGGTTAATCTTGTCGAGTGGCTTAAAATGATGGTAGGGACTAGGATGGCGGAGGAAGTCGTGGACCCAAACCTTGAAGTTAAACCTACAATGCGGGCACTTAAGCGTGCCCTTCTAATTGCTCTAAGATGTGTCGATCCTGAGTCGGAGAAGAGACCCCAAATGGGTCAGGTCGTACGCATGCTTGAAGCTGATGAATTCCCATTTCGCGAGGATCGGAGAAACAGGAAGAGTCGTACATCCAGCATGGATTCGAATCCATGA 1452 0.4552 MSSESSLNTELSKKTFLFGLKLWVLIGICVGALIVLVLSILSICVTSRKKSRRTFEKFSHSQIPIISKEIKVDRVGAHNFHDHREGVLVTDHSKSSDKDSEKLLVHLAMSKSSETDNISQCSSVYHHERGCSSQSGEEGSSGTFRKQSSLANGLASASPLIGLPEVSHLGWGHWFTLRDLQFATNRFSAENVLGEGGYGVVYKGRLVNGTEVAVKKLLNDLGQAEREFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAIRQHGSLSWEARMKVILGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGKSHLTTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAVTGRDPVDYSRPANEVNLVEWLKMMVGTRMAEEVVDPNLEVKPTMRALKRALLIALRCVDPESEKRPQMGQVVRMLEADEFPFREDRRNRKSRTSSMDSNP* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01310 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Eupl06g01310 483 SMART serkin_6 187 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01310 483 FunFam Putative receptor-like protein kinase 169 262 - -
Eupl06g01310 483 FunFam Putative receptor-like serine/threonine-protein kinase 263 473 - -
Eupl06g01310 483 Coils Coil 207 227 - -
Eupl06g01310 483 ProSiteProfiles Protein kinase domain profile. 187 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01310 483 Pfam Protein kinase domain 189 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01310 483 Gene3D Transferase(Phosphotransferase) domain 1 263 476 - -
Eupl06g01310 483 ProSitePatterns Protein kinases ATP-binding region signature. 193 216 IPR017441 GO:0005524
Eupl06g01310 483 Gene3D Phosphorylase Kinase; domain 1 168 262 - -
Eupl06g01310 483 PANTHER OS01G0323000 PROTEIN 1 479 - -
Eupl06g01310 483 SUPERFAMILY Protein kinase-like (PK-like) 171 460 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01310 Eupl-Chr6 22401709 22405707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01310 164 481 Trihelix Transcription Factor Family AT1G70460 48.297 1.07e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Eupl06g01310 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01310 - - nnu:104587694 808.905