Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01306 ATGACAGCACCGATGAGTGCAGAGGGAGAGTCAATCAAGCGGCCTCGTGGTCGGCCAGCTGGCTCAAAGAACAAGCCAAAGCCACCCATCATCATCACCCGAGATAGTGCTAATGCTCTCCGTGCACATGCTATGGAGGTGAGCTCCGGGTGTGATGTCAGTGAGAGCATAGCTAACTTTGCCCGGAGGAAACAACGCGGAATCTCTGTACTTAGTGGGACCGGATGTGTGGTAAATGTTACCTTGCGGCAACCCTCTTCCTCTGGCGCGATCGTGACTCTCCATGGACGTTTCGAGATCGTTTCGTTGCTGGGGTCAATCTTGCCCCCACCAGCACCTCCTGGGATGACAGGCCTCACAATCTACTTAGCAGGGGCCCAAGGACAAGTGGTAGGTGGAAGTGTTGTTGGCTCTCTCATCGCTTCAGGTCCTGTAGTGATCATGGCAGCGTCCTTCGTGAACGCCACTTTCGATCGTCTTCCATTGGATGACGATGAGGTTGCTGCTGCTCATAATCATCATAATTATCAAAACAACCATCATCGTTCACACCACGTAGACGTGTCGAACTTGTATGGGATGCCTCCAAACCTGCTCACCAATGGTAGCTTGGCCCCAGAGGTGTACTCTTGGACATCAGGGCGCTAA 648 0.5293 MTAPMSAEGESIKRPRGRPAGSKNKPKPPIIITRDSANALRAHAMEVSSGCDVSESIANFARRKQRGISVLSGTGCVVNVTLRQPSSSGAIVTLHGRFEIVSLLGSILPPPAPPGMTGLTIYLAGAQGQVVGGSVVGSLIASGPVVIMAASFVNATFDRLPLDDDEVAAAHNHHNYQNNHHRSHHVDVSNLYGMPPNLLTNGSLAPEVYSWTSGR* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01306 215 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 181 IPR014476 GO:0003680
Eupl06g01306 215 PIRSF ESCAROLA 1 213 IPR014476 GO:0003680
Eupl06g01306 215 Pfam Plants and Prokaryotes Conserved (PCC) domain 41 154 IPR005175 -
Eupl06g01306 215 ProSiteProfiles PPC domain profile profile. 37 175 IPR005175 -
Eupl06g01306 215 CDD DUF296 41 126 IPR005175 -
Eupl06g01306 215 SUPERFAMILY AF0104/ALDC/Ptd012-like 37 168 - -
Eupl06g01306 215 MobiDBLite consensus disorder prediction 1 30 - -
Eupl06g01306 215 Gene3D - 40 176 - -
Eupl06g01306 215 FunFam AT-hook motif nuclear-localized protein 40 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01306 Eupl-Chr6 22334870 22335636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01306 6 211 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 70.388 1.84e-97 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01306 - - cave:132182813 339.732