Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01288 ATGGCAACAGAGGAAGCGGAGAGCGTGAAATTGGCGGGAGTTGGTGTTGTTTCTACAGAAGAGGAGAGTAATAATAGGGCTTCTCTTGCTGTCGATGAAGAACCTGAGGAAGGAGAGATCGTCGGAGACGATTCTGCATCTTTGAATCCTCCGACCACCCCCATCGTTCACCAGTCTCACCCATTGGAGAACTCGTGGACCTTCTGGTTCGACAACCCCTACGCCAAAGCCAAGAATGTTGCTTGGGGCAGCTCCATTCGCCCCGTCCACACTTTCGCCACCGTCGAGGAGTTCTGGAGCCTTTACAATAATATACTTCATCCAAGCAAGTTAGCCATAGGAGCAGATTTCCATTGTTTCAAGCACAAAATTGAGCCGAAATGGGAGGACCCTATTTGTGCTAATGGGGGGAAATGGACCATAAGCTTTTCCAGAGGGAAGACTGATACAATGTGGTTGTATACGCTATTGGCAATGATTGGAGAGCAGTTCGATTATGGCGATGAAATATGTGGAGCAGTTGTTAATGTTCGGGCTAAGCAGGAGAAAATATCAATATGGACCAAAAATGCTTCAAATGAAACTGCTCAGGTGAGCATTGGGAGGCAGTGGAAGGAGTTTCTTGATTACAATGACACCATAGGGTTCATATTCCATGAAGATGCGATAAAGCTGGACAGACACGCCAAGAATCGATATAACATATGA 708 0.4647 MATEEAESVKLAGVGVVSTEEESNNRASLAVDEEPEEGEIVGDDSASLNPPTTPIVHQSHPLENSWTFWFDNPYAKAKNVAWGSSIRPVHTFATVEEFWSLYNNILHPSKLAIGADFHCFKHKIEPKWEDPICANGGKWTISFSRGKTDTMWLYTLLAMIGEQFDYGDEICGAVVNVRAKQEKISIWTKNASNETAQVSIGRQWKEFLDYNDTIGFIFHEDAIKLDRHAKNRYNI* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01288 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 32 222 IPR001040 GO:0003723|GO:0003743|GO:0006413
Eupl06g01288 235 SUPERFAMILY eIF4e-like 54 231 IPR023398 -
Eupl06g01288 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 53 235 IPR023398 -
Eupl06g01288 235 MobiDBLite consensus disorder prediction 1 48 - -
Eupl06g01288 235 FunFam Eukaryotic translation initiation factor 4E 52 235 - -
Eupl06g01288 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Eupl06g01288 235 Pfam Eukaryotic initiation factor 4E 61 212 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01288 Eupl-Chr6 21870476 21885002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01288 56 233 Eukaryotic Initiation Factors Gene Family AT4G18040 78.652 6.34e-108 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01288 K03259 - nnu:104608392 367.466