Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01274 ATGCCTGGGAACAAGTACAACCGGAATTCTACCATCCCTTCTAGATTGGAAAGACTCTTGAAAGAAAGGGAGCTAAGGAAATACAACAAGACTTTTCATCCGAATGAGGAGGCAAGTGATGGTAACAAGGAGACTGAGCTCTTTGAGCTTGAATTGGGTTTGAGAGAGGATAATAACTGGGAAAATCCCCATGAGGACGAGTTATTGGAAGCGGCTGCAGCAGCAAGAGCACTCATTGAGGGATGTGAAAGGCAAGGCAGAAGGCCTTCTAAACAACGATTGTTGGTGGTGGCTAACAGGCTGCCAGTCTCTGCAGTTAGGAGGGGTGAGGACTCATGGTCATTGGAGATAAGTGCAGGGGGTCTAGTCAGTGCTCTTCTGGGTGTGAAGGAATTTGAGGCAAAATGGATTGGGTGGGCTGGTGTAAATGTACCAGACGAGATTGGGCAGAGAGCACTAACCAAAGCCCTAGCTGAAAAGAGGTGCATCCCAGTTTTCCTTGACGAAGATATAGTACATCAATATTATAATGGGTACTGTAACAACATCTTGTGGCCTCTTTTCCATTACCTTGGGCTTCCACAAGAAGATCGTCTTGCAACCACCCGTAGTTTCCAGTCTCAATTTGATGCGTATAAAAAGGCAAACCAAATGTTTGCTGATGTGGTTAACGAGCATTATGAAGATGGGGATGTTGTGTGGTGCCATGATTACCATCTTATGTTTCTCCCGAAATGCTTGAAGGAGTATAACAGTAAAATGAAAGTTGGTTGGTTTCTCCACACACCCTTTCCTTCCTCTGAAATCCATAGGACCCTGCCATCTCGATCAGAACTGCTGAGATCTGTTCTTGCTGCTGATTTAGTTGGTTTCCACACATATGATTATGCAAGACACTTTGTAAGTGCGTGTACACGTATTCTTGGGCTTGAGGGAACGCCTGAAGGAGTAGAGGACCAAGGAAAGCTGACTCGGGTGGCTGCGTTTCCTATTGGGATAGATTCCGATCGGTTCATTCGAGCACTTGAGCTTCCACAAGTCCAAACTCATATCAATTATTTGAAGGAAAAATTTGGTGGCCGAAAGGTAATGTTAGGTGTTGATCGTCTTGATATGATTAAAGGAATACCCCAAAAGATATTGGCATTTGAAAAATTCCTTGAGGAAAACCCACCTTGGCGTGATAAAGTAGTGTTGCTGCAAATTGCAGTGCCAACAAGAACAGATGTTCCTGAGTATCAAAAACTTACAAGCCAGGTTCATGAAATTGTTGGACGCATTAATGGCAGATTTGGAACTCTGACTGCTGTTCCAATACATCACTTGGATCGGTCTCTCGACTTTCAAGCATTATGTGCATTATACGCAGTCACTGATGTAGCTCTTGTGACATCTTTGAGGGATGGAATGAATCTTGTCAGCTATGAGTTTGTGGCATGCCAGGATTCAAAGAAAGGGGTTCTTATTCTGAGTGAGTTTGCAGGAGCTGCACAATCTCTTGGAGCTGGAGCTATACTTGTGAACCCATGGAACATCACAGAGGTTGCTTCCTCAATTGATTACGCTTTGAATATGCCCGCTGATGAAAGAGAAAAACGACACCGTCATAACTTTATGCATGTGACTACACACACTGCTCAAGATTGGGCTGAAACCTTTGTAAGTGAATTGAATGATACCGTTGTTGAAGCTCAACTAAGGACAAGACAAATTCCACCTCTACTTCAAGTTGAAGATGCGGTTGAACATTATCTTCAGTCCAGGAATCGATTGCTAATACTGGGATTCAATTCTACGTTAACTGAACCAGTGGACACTCCTGGGAGAAGAGGGGGTGATCAAATTAAAGAGATGGAACTTAAATTGCACCCAGAGTTGAAGGAACCCTTGACAATTCTTTGCAGTGACCCAAAGACAACAATTGTGGTCCTCAGTGGAAGTGACAGAAGTGTCCTAGACGATAACTTTGGAGAGTACAACATGTGGTTAGCAGCAGAAAATGGCATGTTTTTGCGTCATACAAAGGGAGAATGGATGACAACCATGCCGGAACATCTAAACATGGATTGGGTCGACAGTGTGAAGCATGTTTTTGAGTATTTCACAGCAAGAACACCTCGATCTCATTTTGAACTTCGTGAGACTTCACTCGTATGGAATTACAAGTATGCAGATGTTGAATTTGGAAGGCTTCAAGCAAGGGATATGTTGCAGCATCTATGGACGGGGCCAATTTCCAATGCAGCTGTTGATGTTGTCCAAGGTAGCCGATCAGTTGAAGTCCGATCCGTCGGTGTAACAAAGGGTGCAGCGATTGATCGTATCTTGGGAGAGATAGTTCATAGCAAATGCATGGTGACGCCAATTGATTATGTCCTGTGCGTTGGGCACTTTCTAGGGAAGGATGAAGATATCTATACATTCTTTGAGCCAGAGCTTCCTGCTGAACCGGGAGGTACTGCAAGAAGCAAGATAGCCGATGCAGTCAAGTTATATGCTGAGAGGCGGTCTACACCAAAGCCGATGCTCAGTAAAGGTGGGTCCAAGGCATCTCAGGGTCGGTCACAAAGGACATCGGCAACCTTGGAGAAAAGGTCAAGCAATCACAGTAGTGGGAGTGGATGGCGGTCAGCGCAGGAGAATATTGCTTGGCATGAGGGTTCATCAGTGCTCGATCTCAAGGGAGAGAATTACTTCTCTTGTGCTGTCGGGCGGAAGCGCTCCAACGCACGGTATCTCCTCAACTCAGCAGATGACGTTGTCACATTTCTAAAGGATATAGCGGCAGCAGCGTCTAGTTGA 2802 0.4493 MPGNKYNRNSTIPSRLERLLKERELRKYNKTFHPNEEASDGNKETELFELELGLREDNNWENPHEDELLEAAAAARALIEGCERQGRRPSKQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEAKWIGWAGVNVPDEIGQRALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNEHYEDGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALELPQVQTHINYLKEKFGGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPPWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFQALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIDYALNMPADEREKRHRHNFMHVTTHTAQDWAETFVSELNDTVVEAQLRTRQIPPLLQVEDAVEHYLQSRNRLLILGFNSTLTEPVDTPGRRGGDQIKEMELKLHPELKEPLTILCSDPKTTIVVLSGSDRSVLDDNFGEYNMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTARTPRSHFELRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRSVGVTKGAAIDRILGEIVHSKCMVTPIDYVLCVGHFLGKDEDIYTFFEPELPAEPGGTARSKIADAVKLYAERRSTPKPMLSKGGSKASQGRSQRTSATLEKRSSNHSSGSGWRSAQENIAWHEGSSVLDLKGENYFSCAVGRKRSNARYLLNSADDVVTFLKDIAAAASS* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01274 933 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 340 542 - -
Eupl06g01274 933 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 85 928 IPR001830 GO:0003824|GO:0005992
Eupl06g01274 933 MobiDBLite consensus disorder prediction 839 878 - -
Eupl06g01274 933 Gene3D Glycogen Phosphorylase B; 340 542 - -
Eupl06g01274 933 Pfam Glycosyltransferase family 20 93 558 IPR001830 GO:0003824|GO:0005992
Eupl06g01274 933 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 92 561 - -
Eupl06g01274 933 FunFam Alpha,alpha-trehalose-phosphate synthase 618 688 - -
Eupl06g01274 933 CDD HAD_TPP 591 812 - -
Eupl06g01274 933 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 85 339 - -
Eupl06g01274 933 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 93 558 IPR012766 GO:0003825|GO:0005992
Eupl06g01274 933 Gene3D - 618 778 IPR023214 -
Eupl06g01274 933 MobiDBLite consensus disorder prediction 844 878 - -
Eupl06g01274 933 CDD GT20_TPS 93 558 IPR001830 GO:0003824|GO:0005992
Eupl06g01274 933 Pfam Trehalose-phosphatase 617 812 IPR003337 GO:0003824|GO:0005992
Eupl06g01274 933 Gene3D - 684 764 - -
Eupl06g01274 933 Gene3D Glycogen Phosphorylase B; 85 339 - -
Eupl06g01274 933 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 684 764 - -
Eupl06g01274 933 SUPERFAMILY HAD-like 590 780 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01274 Eupl-Chr6 21618219 21670010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01274 1 933 Trehalose Biosynthesis Gene Families AT1G78580 78.384 0.0 1483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01274 K16055 - nnu:104608984 1630.15