Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01266 GGTGATCTTTGTGCTTTCTTGAAAAAAAAAGGAGCTTTAAAGCCGACAACAGCATTGAAATTTGCACTTGATATTGCAAGGGGTATGAATTACTTGCATGAGCATAAGCCTGAAGCAATAATTCACCGTGATCTTGAGCCTTCAAATATACTGCGGGATGATTCCGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGCTGCTGAAAGTTGCAAATACAGTTAAAGAAGATAGACCTGTAATGTGTCAAGACAATTCCTGTCGGTATGTGGCTCCGGAGGTTTTTAGAAATGAAGAATACGATACGAAAGTGGATTCAATAGCTTCTAAGATTTTATCTCAAGCACTACATTGGAGAAGTATGGTTAGAACCTATGACATTGCAGAGATGGCATGA 399 0.396 GDLCAFLKKKGALKPTTALKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVANTVKEDRPVMCQDNSCRYVAPEVFRNEEYDTKVDSIASKILSQALHWRSMVRTYDIAEMA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01266 132 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 112 - -
Eupl06g01266 132 Pfam Protein kinase domain 2 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01266 132 Gene3D Transferase(Phosphotransferase) domain 1 1 107 - -
Eupl06g01266 132 SUPERFAMILY Protein kinase-like (PK-like) 1 106 IPR011009 -
Eupl06g01266 132 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01266 Eupl-Chr6 21363459 21377791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01266 1 115 MAP Kinase Kinase Kinase AT3G58760 72.414 9.78e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Eupl06g01266 Pkinase 1.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01266 - - minc:123223750 208.764