Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01249 ATGTCTGTAGCTGTCGTCGTTGGAATTGTGGCTTCAATTATATGCATTTTCATCATGATTCTGGGTATTCTTTGGTGGAAAGGTTATCTTGAAGATCTGAGAGGTATAGACCTACAAACTGGTTCCATTACCGTAACGCAAATTAAGGCTGCTACGAATAACTTTGATGCTGCAAACAAGATCGAAGAAGGGGGTTTCCCACAAACTGGGTCCTTTACCCTATGGCAAATTAAGGCTGCTACAAATAACTTTGATGATGCAAACATGATTGGAGAAGGAGGTTTTGGACCCGTTTACAAGGGACTTCTATCAGATGGTACCATGATTGCAGTTAAGCAGCTTTCTTCCAGATCAAAGCAAGGAAATCGTGAATTTGTGAATGAGATAGGCATGATTTCTGCACTTCAACACCCTAATCTCGTAAAGCTTTATGGATGTTGTATTGAAGGGAATCAATTATTGCTTGTATATGAATACTTGGAAAATAACAGCCTTGCCCGTGCTTTGTTCGGTCCAGAAGAATGCCAACTGAAATTAGATTGGCCGACTCGGCGCAAGATCTGTGTTGGCATAGCAAGGGGTCTAGTTTATCTCCATGAAGAATCAAAACTGAAAATTGTCCACAGAGATATCAAGGCCACAAATGTACTGCTTGATAAGGATCTTAACCCTAAGATATCTGACTTTGGATTGGCGAAACTTGATGAAGAGGACAACACACACATCAGCACTCGGATTGCTGGAACTTATGGATATATGGCACCGGAGTATGCAATGCGGGGTTACCTAACAGACAAAGCAGATGTTTATAGCTTCGGAGTTGTAGCCCTTGAAATTGTTAGCGGTAGGAGCAATGTAAATTACAGGCCGAAAATGGACAGTGTTTATCTTCTCGATTTGGCATTGGTTCTGCAAGAGAAAGGGAATTTAATGGAGTTAGTGGATCCAAGGTTGGAAGAATTCAACAAGGAAGAGGTTATGGAGATGATTAATGTTGCTCTCCAATGCACTAATGCATCTTCGACACTTAGGCCTACAATGTCTGCAGTGGTGAGCATGCTCGAAGGTCAGACCGTTGTGGAGGAGTTTGTTCCAGATCCAGGTACCTCCAGTGATGATTTGAAGTTTAAAGCAATCAGGAACTATTATCAACAGAGCCAAGATCGGACTAAGGGTGAAAGTCAGATGCAGAGTATGTCGATGGGTGTGCTATCGACCGGATCTTCCACATCTACTTATGACCTCTACCCAATCAATATGGATTCCCAATATTTGACTCAAAGGGAGTAG 1290 0.4209 MSVAVVVGIVASIICIFIMILGILWWKGYLEDLRGIDLQTGSITVTQIKAATNNFDAANKIEEGGFPQTGSFTLWQIKAATNNFDDANMIGEGGFGPVYKGLLSDGTMIAVKQLSSRSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYLENNSLARALFGPEECQLKLDWPTRRKICVGIARGLVYLHEESKLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGRSNVNYRPKMDSVYLLDLALVLQEKGNLMELVDPRLEEFNKEEVMEMINVALQCTNASSTLRPTMSAVVSMLEGQTVVEEFVPDPGTSSDDLKFKAIRNYYQQSQDRTKGESQMQSMSMGVLSTGSSTSTYDLYPINMDSQYLTQRE* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01249 429 SUPERFAMILY Protein kinase-like (PK-like) 68 367 IPR011009 -
Eupl06g01249 429 Gene3D Transferase(Phosphotransferase) domain 1 160 364 - -
Eupl06g01249 429 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 67 159 - -
Eupl06g01249 429 Pfam Protein tyrosine and serine/threonine kinase 88 354 IPR001245 GO:0004672|GO:0006468
Eupl06g01249 429 SMART serkin_6 84 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01249 429 ProSiteProfiles Protein kinase domain profile. 84 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01249 429 FunFam Putative LRR receptor-like serine/threonine-protein kinase 160 366 - -
Eupl06g01249 429 CDD STKc_IRAK 90 356 - -
Eupl06g01249 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Eupl06g01249 429 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 68 393 - -
Eupl06g01249 429 Gene3D Phosphorylase Kinase; domain 1 67 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01249 Eupl-Chr6 20976179 20981565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01249 3 387 Receptor kinase-like Gene Family AT1G07650 63.520 4.01e-168 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl06g01249 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01249 - - nnu:104589772 603.979