Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01240 ATGTTGAGGGAAGAGGTGATTACGTTGTTTGGGCGTTTTTTCTTTGTTTGGGTTATTTGGTTCACTTGCTTTGTGTCGTTCGCATTCGGAGAGACTTGTCTGCCAGCTGAAGAAGTGGATGCTCTACGACAAATAGGGAGGACGTTAGGGAAGAACAACTGGAACTTTGACATAGATCCGTGCAGCGGAGAAGGGGGATGGGCGACGCCTAAGTTCGTGCAGGAGGAGAACTTCGAGAATACCGTCCGCTGCGACGGTGGCTATAACAAGACCGACGGCGGCAATAACAAGACCGTCTGCCACATCGCCACCATAGCGCTTGCAGGTCAGAATCTACAAGGCGTGCTCCCAGTAGAGCTGGTCAATCTTCCCAATCTCACTGCAATCGATCTCTCTCGCAACTATCTTAATGGTACAATACCTCGACAATGGGCTACCATGAAATTGGAGGACATCCAGCTACATGGAAACCGGTTATCGGGTCCAATCCCAAAAGAATTAGGAAACATCAGCACTCTCAAAGCATTGATTCTCGATTTCAACTTCTTCTTTGGAAATCTTCCTCCACACCTTGGGAATCTGACCAGCATAAAGAGATTCCTGATTACCTCCAACTATTTTAATGGGCCGTTGCCGGACACACTTGCCAAACTGACCACCTTGACGGACTTTCGGATAAGTGATAACAACTTTACTGGAAACATACCCAATTTTATACAAAATTGGACAAATCTCACGAAATTAGAGATACAGGCAAGTGGTTTGGAAGGGCCTATTCCTCCTGGCATTTTTGGATTGAAAGAATTAACGGACATGAAGATTAGTGACATAAATGGAACTGGATGGGCTTTACCGCCACTGAGTAACATGACAAAGATGAAGAAACTGGTATTAAGGAGTTGCAATATTACTGGAGAGTTGGCTGAAGATCTTGGGGAAAATATTGTCACTATGCAAAGTTTAGAAACATTGCAAATTAAGGCTGCTACGAACAACTTCGATGTTGTAAACAAGATCGGAGAAGGAGGTTTTGGACCCGTTTACAAGGGACATCTATCAGATGGTACCCTGATTGCAGTGAAGCAGCTTTCTTCCAAATCAAAGCAAGGAAATCGTGAATTTGTGAATGAGATAGGAATGATTTCTGCACTTCAACACCCTAACCTCGTAAGGCTTTATGGATGTTGTATTGAAGGGAATCAATTATTGCTAGTATATGAATACTTGGAAAATAATAGCCTTGCCCGTGCTTTGTTTGTGGATATATGGCACCGGAGTATGCAATGTGGGGTTACCTGA 1299 0.4396 MLREEVITLFGRFFFVWVIWFTCFVSFAFGETCLPAEEVDALRQIGRTLGKNNWNFDIDPCSGEGGWATPKFVQEENFENTVRCDGGYNKTDGGNNKTVCHIATIALAGQNLQGVLPVELVNLPNLTAIDLSRNYLNGTIPRQWATMKLEDIQLHGNRLSGPIPKELGNISTLKALILDFNFFFGNLPPHLGNLTSIKRFLITSNYFNGPLPDTLAKLTTLTDFRISDNNFTGNIPNFIQNWTNLTKLEIQASGLEGPIPPGIFGLKELTDMKISDINGTGWALPPLSNMTKMKKLVLRSCNITGELAEDLGENIVTMQSLETLQIKAATNNFDVVNKIGEGGFGPVYKGHLSDGTLIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVRLYGCCIEGNQLLLVYEYLENNSLARALFVDIWHRSMQCGVT* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01240 432 SUPERFAMILY Protein kinase-like (PK-like) 318 421 IPR011009 -
Eupl06g01240 432 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 40 211 - -
Eupl06g01240 432 SUPERFAMILY L domain-like 98 327 - -
Eupl06g01240 432 Gene3D Ribonuclease Inhibitor 37 205 IPR032675 -
Eupl06g01240 432 Gene3D Phosphorylase Kinase; domain 1 319 408 - -
Eupl06g01240 432 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 304 408 - -
Eupl06g01240 432 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 325 - -
Eupl06g01240 432 Pfam Protein tyrosine and serine/threonine kinase 336 418 IPR001245 GO:0004672|GO:0006468
Eupl06g01240 432 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 212 278 - -
Eupl06g01240 432 Gene3D Ribonuclease Inhibitor 206 318 IPR032675 -
Eupl06g01240 432 ProSiteProfiles Protein kinase domain profile. 333 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01240 Eupl-Chr6 20757302 20796663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01240 294 419 Receptor kinase-like Gene Family AT1G53420 68.254 5.29e-47 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl06g01240 PK_Tyr_Ser-Thr 1.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01240 - - ming:122088670 337.421