Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01239 ATGTTGAGGGAAGAGGTGGTTACGTTGTTTGGGCGTTTTTTCTTTGTTTGGGTTATTGGGTTCACTTGCTTCGTATCGTTCGCATTCGGAGAGACTTGTCTGCCAGCTGACGAAGTGGAGGCTCTACGAGAAATAGCGAATACGTTGAAGAAGACCAACTGGAACTTCAGCGCAGACCCCTGCAGCGGAGAAGGGGGATGGGCGACGCCTAAGGACGTGAAAGAGGAGGAATTCGAGAATACCGTCCGGTGCGACGACTATAACAACACCGTCTGCCACGTCGTCCGCATAGCGCTTGCTGGTCAGAATCTATCAGGCGTGCTCCCAGAAGAGCTGGTCAAGCTTCCCAATCTCATTGAAATTGATCTCTCTCGCAACTACCTTAACGGTACAATACCTCGACAATGGGCTACCATGAAATTGGTGATCATCCAGCTACATGGAAACCGGTTATCGGGTCCAATCCCAAGAGAATTAGGAAACATCAGTACTCTCGAAGAATTGGTTCTCGATTTCAACTTCTTCTCTGGAAATCTTCCTCTAGAGCTTGGGAATCTGACCAGCATAAAGAGATTCCTGATTAACTCCAACTATTTTAATGGGGCGTTGCCAGACACACTTGCCAAACTGACCACCTTGACGGACTTTCGGATAAGTGATAACAACTTTACTGGAAACATACCCAATTTTATACAAAATTGGACAAATCTCACGAAATTAGTGATACAGGCAAGCGGTTTGGAAGGGCCTATTCCTCCTGGCATTTTTGGTTTGACAGAATTAACTGACATGAAGATTAGTGACATAAATGGAATTGAATGGACTTTACCGCCCCTGAGTAACATGACAAAGCTGAAGATCCTGATATTAAGGAGTTGCAATATTACTGGAGAGTTGACTGAAGATCTTGGGGAAAATCTTGCGACTATGGAAAATTTAGGAACATTCAAGTTGGACTCTCTTATCAGCAACTTTTGGTGGAATGGCTCCTTGGATAAAAATTTGAGAGGTCTAGACCTACAAACTGGTTCCTTTACCCTAAGGCAAATTAAGGCTGCTACAAACAACTTTGATGCTGTAAACAAGATCGGAGAAGGAGGTTTTGGACCCGTTTACAAGGGACATCTATCAGATGGTACCATGGTTGCAGTGAAGCAGCTTTCTTCCAAATCAAAGCAAGGAAATCGTGAATTTGTGAATGAGATAGGCATGATTTCTGCACTTCAACACCCTAATCTCGTAAGGCTTTATGGATGTTGTATTGAAGGGGATCAATTATTGCTAGTATACGAATACTTGGAAAATAACAGCCTTGCCCGTGCTTTGTTTGGTCCAGAAGAAAGCCGACTGAAATTGGATTGGCCGACTCGGCACAAGATTTGTGTTGGCATAGCAAGGGGTCTAGCTTATCTCCATGAAGAATCGAGACTGAAGATTGTTCACAGAGATATCAAGGCTACAAATGTACTGCTTGATAAGGATCTTAACCCTAAGATATCTGACTTTGGATTGGCGAAACTTGATGAAGAGGGCAACACTCACATCAGCACTCGGATTGCTGGAACTTATGGATATATGGCACCGGAGTATGCAATGTGGGGTTACTTGACATACAAAGCAGATGTTTATAGCTTTGGAGTTGTAACCCTTGAAATTGTCAGTGGTAGGACCAACTTAAATTACAGCCTGAAAGAGGACAGTGCTTATAATCTTCTCGATTTGGCATCGGTTCTGCAAGAGAAAGGGAGTTTAATGGAGTTAGTGGATCCAAGGTTGGAAGAATTCAACAAAGAAGAGGTTATGGAGATGATTAAGGTTGCTCTCCGATGCACTAATGCATCTTCGACACTTAGGCCTATAATGTCTAATGTGGTAAGCATGCTCGAAGGCCAAACTGTTGTTGAGGAGTTTGATCCAGGTACCACCAGCGATGATTTGAAGTCTAAAGCAATTAGGAACCATGATCAACAGAGCGAAGATCAGAGTATGGGCGAAAGCCAGACTCATAATATGTCGATGGCTGGGCCATCGACTGGATCTTCCACATCTGCCCATGATCTCTACCCAGTCAATATTGATTCCCACTATTTGATTCAAACGGAGTAG 2106 0.4368 MLREEVVTLFGRFFFVWVIGFTCFVSFAFGETCLPADEVEALREIANTLKKTNWNFSADPCSGEGGWATPKDVKEEEFENTVRCDDYNNTVCHVVRIALAGQNLSGVLPEELVKLPNLIEIDLSRNYLNGTIPRQWATMKLVIIQLHGNRLSGPIPRELGNISTLEELVLDFNFFSGNLPLELGNLTSIKRFLINSNYFNGALPDTLAKLTTLTDFRISDNNFTGNIPNFIQNWTNLTKLVIQASGLEGPIPPGIFGLTELTDMKISDINGIEWTLPPLSNMTKLKILILRSCNITGELTEDLGENLATMENLGTFKLDSLISNFWWNGSLDKNLRGLDLQTGSFTLRQIKAATNNFDAVNKIGEGGFGPVYKGHLSDGTMVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVRLYGCCIEGDQLLLVYEYLENNSLARALFGPEESRLKLDWPTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEGNTHISTRIAGTYGYMAPEYAMWGYLTYKADVYSFGVVTLEIVSGRTNLNYSLKEDSAYNLLDLASVLQEKGSLMELVDPRLEEFNKEEVMEMIKVALRCTNASSTLRPIMSNVVSMLEGQTVVEEFDPGTTSDDLKSKAIRNHDQQSEDQSMGESQTHNMSMAGPSTGSSTSAHDLYPVNIDSHYLIQTE* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01239 701 Gene3D Ribonuclease Inhibitor 33 324 IPR032675 -
Eupl06g01239 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Eupl06g01239 701 ProSiteProfiles Protein kinase domain profile. 357 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01239 701 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 327 663 - -
Eupl06g01239 701 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 35 270 - -
Eupl06g01239 701 Gene3D Transferase(Phosphotransferase) domain 1 433 645 - -
Eupl06g01239 701 SUPERFAMILY Protein kinase-like (PK-like) 343 630 IPR011009 -
Eupl06g01239 701 Gene3D Phosphorylase Kinase; domain 1 330 432 - -
Eupl06g01239 701 MobiDBLite consensus disorder prediction 660 686 - -
Eupl06g01239 701 MobiDBLite consensus disorder prediction 637 686 - -
Eupl06g01239 701 MobiDBLite consensus disorder prediction 640 659 - -
Eupl06g01239 701 Pfam Protein kinase domain 359 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01239 701 SMART serkin_6 357 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01239 701 FunFam Putative LRR receptor-like serine/threonine-protein kinase 433 639 - -
Eupl06g01239 701 CDD STKc_IRAK 363 630 - -
Eupl06g01239 701 SUPERFAMILY L domain-like 90 305 - -
Eupl06g01239 701 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 327 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01239 Eupl-Chr6 20723137 20740642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01239 321 686 Receptor kinase-like Gene Family AT1G07650 67.380 2.23e-164 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl06g01239 Pkinase 5.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01239 - - nnu:104589772 565.844