Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01225 ATGGATGGATCTCAGGGCGGTTCGAATGCACCGCCTCCTTTTCTTGTGAAGACGTATGAGATGGTGGATGACCCGTCCACCAACTCTATTGTGTCTTGGAGTCCGTCTAACAGTAGTTTCATCGTGTGGAATCATCCGGAGTTCGCGAGGATCTTGCTGCCCAAGTACTTCAAGCACAACAATTTTTCCAGCTTCATCAGGCAGCTTAATACATATGGTTTCAGAAAAATTGATCCGGATCAGTGGGAATTCGCAAACGAGGAGTTTATAAGAGGTCAGAGACACCTTCTGAAGAACATCCACAGACGCAAGCCTATCCACAGTCATTCACTACAGAGCCTCCAAGGACAATCAAGTTCTTCAGGAACATTAGCTGAATCAGAAAAGCAGGAGCTTGAGGAGGAAATTGAGAAGTTGAAACATGAGAAGAGTATGCTTTTTAATGAGCTACAAAGACATACACAGGAGCAGCAAGGAATGGAGTTGCAAATGCGGTCTTTGGAGGAACGTTTGCATCAAATGGAACTCCGTCAGCGGCAAATGATGGCCTTCTTGGCTAGAATCATGCAGAGACCTGGGTTTGTCTCCAATCTTATCCAACAGTCTGAAAAGCATACTAAAAGGAGAAGGTTGCTGAAACCGGATTACTTCTATGATGAAGCCGATATGGCAGAGAACCAAGTTGTGACAATCCAACCAGTGACTAGAGAGAATATGAATGCTGTTTCTATGCCTGTGTTAAACGTGGAGCCGTTTGAGAAGCTGGAATCATCCTTAAATTGTTGGGAGAATTTTCTACGTGGGGTTGGACAAGCTTCTGGTGAAGAAATGCATACTGTAGGAGTTTCTTTGCAGCCTTCTGCAATCGTCTTTACTGAAATGCATGCGTCATCTGGAGACACAGACGTAAATATGCAACCACAGTCACCTAAATTGCATACGCATTCGCCTCGTTCAAGAGATATACACTCCTCTCCTGAGTTGGCGGAATCTACAAGTCATGTGGGAAGCCCAGTTATTTCTTCTATTCAACTTAATGCAGATATTCGGCCCAAAGTATCTGGAATTGACGTGAATTCCAAGCCTATTGCTCCTGAGATTGAGATTGAGGCTTCGAAAGAACAGGCAGTTGCAACCACGACTTGTGCTGTGCCAACTGGGGCGAATGATGTATTCTGGGAACAGTTCCTAACTGAAACTCCTGGTTCTACGGACACACAGGAGGCCCAGTCTGAAAGAAGGGACACTGAGGATGGAAAGAATAGCAAGCCTGCTGATCGTGGGAAATTTTGGTGGAACATGAAGAATTTAGATAACCTTACAGAACAGATGGGGCACCTCACTCCAGCCGGAAGAACCTAA 1362 0.4515 MDGSQGGSNAPPPFLVKTYEMVDDPSTNSIVSWSPSNSSFIVWNHPEFARILLPKYFKHNNFSSFIRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPIHSHSLQSLQGQSSSSGTLAESEKQELEEEIEKLKHEKSMLFNELQRHTQEQQGMELQMRSLEERLHQMELRQRQMMAFLARIMQRPGFVSNLIQQSEKHTKRRRLLKPDYFYDEADMAENQVVTIQPVTRENMNAVSMPVLNVEPFEKLESSLNCWENFLRGVGQASGEEMHTVGVSLQPSAIVFTEMHASSGDTDVNMQPQSPKLHTHSPRSRDIHSSPELAESTSHVGSPVISSIQLNADIRPKVSGIDVNSKPIAPEIEIEASKEQAVATTTCAVPTGANDVFWEQFLTETPGSTDTQEAQSERRDTEDGKNSKPADRGKFWWNMKNLDNLTEQMGHLTPAGRT* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01225 453 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g01225 453 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g01225 453 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g01225 453 Coils Coil 122 177 - -
Eupl06g01225 453 Gene3D - 7 104 IPR036388 -
Eupl06g01225 453 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g01225 453 MobiDBLite consensus disorder prediction 408 425 - -
Eupl06g01225 453 MobiDBLite consensus disorder prediction 107 131 - -
Eupl06g01225 453 MobiDBLite consensus disorder prediction 398 430 - -
Eupl06g01225 453 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g01225 453 MobiDBLite consensus disorder prediction 298 313 - -
Eupl06g01225 453 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g01225 453 MobiDBLite consensus disorder prediction 298 335 - -
Eupl06g01225 453 FunFam Heat shock transcription factor 1 7 104 - -
Eupl06g01225 453 SUPERFAMILY "Winged helix" DNA-binding domain 10 103 IPR036390 -
Eupl06g01225 453 MobiDBLite consensus disorder prediction 109 126 - -
Eupl06g01225 453 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 4 281 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01225 Eupl-Chr6 20453019 20454490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01225 1 453 HSF AT4G18880 42.082 1.22e-97 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl06g01225 HSF_DNA-bind 1.6e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01225 K09419 - msin:131240946 607.831