Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01220 ATGAAATGGGGAAGAAAGAACTCATCCTCTTCTGGCCTTTCTTCACTCACTCAAGTCTTCCCTATTTCTTGGCTTTCCAAATTCAAGCAAATGAACAGCAAACCCAAATCCCAACACACAAAAACCAAGCAAAAAAACAAACCCACGAGTCCATCCTTACCTGTTAGTTTTAGAGATCCTCGGCGCTACAATGGAGATGTCGACGGTGATGATGACGCTTACTGGCGACTTTCTTTTGGAGAAGAGAGTGTGGAAGGTAAGAAGAACAGAGGTGTTTTGAGATCTGTTTGGTATGATTCAGATGATGAGCTTGAATTTCCTTTGTCGAGTTACCGAAGTGGTAGATCAACTACTAGGAAAGTAGTAGCAAAAGAAGATACTCAGAAGTTTAGTGACATGGTATCCGATATTAGAAAGATGAGAGAGTTAGGTGACAAAGATCGAGAAGAGACTGGTGTTTCGGAAACACCGCAGAAGAAAATTCAGAAGGGTCGGAAAGATACTAATCAGAAATCAAGAAAAAAAGATAGAAGAATTTTGCAAGAAGTGTGTTCAGACTCGGGAAGAGAATCGATTAAAGTAAGTCAGAGAACTAGTACAGAACCAGAAGAAAAAAGGTTCTTGGATTTGGAACCAGTAACAACATTTCAAACATCTGAGAACGATTACCAAAGTTTCAAGGCTTTAGATTCAAGGAAATCTCACTACATCTCTTCCTTGAATTCAAGAATTACTGAGCAGAGAGGAACGATTGAAGAAGAAGATCACGAATTAGCGGCTATGAATTCGAAGATTTCAGATCAAAGTTTAGAAGAAGAAGAAGATGATGATGAGGAGGAGGAGGAGGAGGAGGACGAAGGAGCAGATTCAGAGCGAAAAACAGTGAAAAAATCGAAGATTAAGGATCTCTTGTTGCAAAATGAGAAACAGAGGAAATCACTTTATTGGAACAGAGAACTACAGAAAAGAAGAGCAAAGAAGAGTTGCAAAGTTAGAGTTTATTCTCCAAGAACCGCTTCGAAGATCGAAATTTGCAAAATTAGAGCACTTGAAGACATGAAGAAGGCCAAGAACAAGAAGAAGGGAAGAACAGTAGAGGGGAGACCAGCTTTGGAGAGTTTTGCTGTGGTAAAATGCTCGTTCGACCCTCAGAAGGACTTCAGAGATTCAATGGTAGAGATGATTGCGGAGAATAGGATCAGACAACCGGAAGAGCTCGAAAACCTCTTGGCTTGTTATCTTTCTTTGAATTCAGACGAGTACCATGATCTCATTATCAAGGCCTTCCGCCAGGTATGGTTCGATTTGGACCAGTCTTGTTTTGATTCTAAATTACAAAATGATGATCATAGTTACAATGATTATTAG 1368 0.3984 MKWGRKNSSSSGLSSLTQVFPISWLSKFKQMNSKPKSQHTKTKQKNKPTSPSLPVSFRDPRRYNGDVDGDDDAYWRLSFGEESVEGKKNRGVLRSVWYDSDDELEFPLSSYRSGRSTTRKVVAKEDTQKFSDMVSDIRKMRELGDKDREETGVSETPQKKIQKGRKDTNQKSRKKDRRILQEVCSDSGRESIKVSQRTSTEPEEKRFLDLEPVTTFQTSENDYQSFKALDSRKSHYISSLNSRITEQRGTIEEEDHELAAMNSKISDQSLEEEEDDDEEEEEEEDEGADSERKTVKKSKIKDLLLQNEKQRKSLYWNRELQKRRAKKSCKVRVYSPRTASKIEICKIRALEDMKKAKNKKKGRTVEGRPALESFAVVKCSFDPQKDFRDSMVEMIAENRIRQPEELENLLACYLSLNSDEYHDLIIKAFRQVWFDLDQSCFDSKLQNDDHSYNDY* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01220 455 Pfam Transcriptional repressor, ovate 380 436 IPR006458 -
Eupl06g01220 455 NCBIfam uncharacterized plant-specific domain TIGR01568 375 437 IPR006458 -
Eupl06g01220 455 MobiDBLite consensus disorder prediction 241 296 - -
Eupl06g01220 455 MobiDBLite consensus disorder prediction 196 210 - -
Eupl06g01220 455 ProSiteProfiles OVATE domain profile. 376 435 IPR006458 -
Eupl06g01220 455 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 195 437 IPR038933 GO:0045892
Eupl06g01220 455 MobiDBLite consensus disorder prediction 31 70 - -
Eupl06g01220 455 MobiDBLite consensus disorder prediction 133 212 - -
Eupl06g01220 455 MobiDBLite consensus disorder prediction 247 261 - -
Eupl06g01220 455 MobiDBLite consensus disorder prediction 269 288 - -
Eupl06g01220 455 MobiDBLite consensus disorder prediction 133 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01220 Eupl-Chr6 20437746 20439113 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Eupl06g01220 Ovate 6.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01220 - - nnu:104586567 376.711