Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01218 ATGTTGTCTAGATCGTATACCAATCTTTTAGATCTGGCGTCCGGGAATTTCCCGGCGATGGGGATGGGGCGTGAAAGGAGGCGCCTTCCTCGGGTAATGACTGTTCCGGGTATAGTCTCAGAGCTCGATGATGATCAGGCTAATAGTGTCTCGTCGGATGTTCCATCGTCGATAGCTCAAGATCGGATAATTATTGTTGCGAACCAGCTCCCTGTTAAAGCCAAGCGGAGACTGGACAATAAAGGGTGGAGTTTCAGTTGGGACGAGGACTCGTTGCTCTTGCAGCTGAAGGATGGTTTGCCCGATGACATGGAGGTGATCTACGTTGGGTCCTTGAAGGTTGATGTGGACGTGAGCGAACAGGATGATGTGTCGCAGATTCTGTTGGACAGATTCAAATCTGTACCCACTTTCCTCCCCCCTGATATTTTGTCAAAATACTACCATGGTTTCTGCAAGCAGCATCTGTGGCCTCTTTTTCATTACATGCTCCCTTTCTCAGCTGATCATGGTGGCAGGTTTGATCGGTCTCTGTGGGAGGCATATGTGTATGTGAATAAGTTGTTCTCGCAGAAGGTGATTGAGGTGATAAACCCAGAAGACGACTATGTCTGGATCCATGACTACCATCTAATGGTGTTGCCCACCTTCTTGAGGAGGCGTTTTAACCGACTGAGAATGGGATTCTTCCTCCACAGTCCATTTCCTTCGTCTGAAATCTATAGGACTCTTCCTGTCAGAGAAGAGATCCTCAAGGCACTTCTGAATTCAGACTTGATTGGTTTCCACACCTTCGATTACGCCCGCCATTTTCTTTCTTGTTGCAGTCGGATGTTGGGTTTGGAATATCAATCGAAAAGGGGCTATATTGGGTTAGAATATTTTGGAAGGACAATCGGGATCAAGATTATGCCAGTTGGCATTCACATGGGTCAGATTGAGTCTCTGTTGAGTCTTGCAGATAAAGAGTGGAGGGTAGGGGAACTTAAACAGCAGTTTGAAGGAAAGACTGTGTTGCTTGGCGTCGATGATATGGATATCTTCAAAGGGATAAATTTGAAGCTCTTAGCAATGGAACAACTGCTCAAGCAGCACCCTAAGTGGCAGGGAAGGGCTGTATTGGTTCAGATTGCAAATCCTGCAAGGGGTAGAGGTAGAGATCTTGAGGAAATACAGGCTGAAATACATGCAAGCTGCAAAAGGATCAATGATGAATTCAGACAGCCTGGTTATGAACCAATAGTGTTTATTGACAGGCCAGTTTCAGTCAGTGAAAGAATGGCTTTTTACACCATTGCTGAATGTGTTGTTGTCACAGCTGTAAGGGACGGGATGAACCTTACTCCATATGAGTATATTGTATGTAGACAGGGAGCCTCTAGACCCGATTTGGGTTCTGACTCGAGCAGCCCCAGAAAGAGTATGTTAGTGGTGTCCGAGTTCATAGGATGTTCCCCTTCACTGAGTGGGGCAATCAGGGTCAACCCATGGAATGTTGAAACCACTGCTGAGGCTATGAATGAGGCAATCTCAATGCCTGATCCAGAGAAACAGTTGCGACATGAGAAGCACTACAGGTATGTTAGCACCCACGATGTGGCTTATTGGTCAAAGAGCTTCTTGCAAGATATGGAAAGAACTTGCAGAGACCATTTCAGGAGAAGATGTTGGGGTATCGGGCTGAGCTTTGGTTTCAGAGTTGTGGCACTTGATTCTAATTTCAGAAAGCTTTCCATAGACGACATTGTATCTGCGTATGCAAGGGCCAAGAATAGAGCCATACTGTTGGACTACGATGGCACTGTGATGCCCCAAACTTCCATCAATAAGACCCCAAGTGAAGAGGTTATCTCAATCCTAAACACACTCTGTGGTGACCTGAAAAACACTGTTTTCATTGTCAGCGGAAGAGGGCGCGGCAGCTTAGGCAAGTGGTTCTCTCCATGCCAGAAGCTTGGAATTGCAGCAGAACATGGCTACTTCTTGAGGTGGTCACAAGATGAAGAATGGGAAATCTGTGGCCAGAATACTGATTTTGGGTGGATACAGATAGCTGAGCCTGTAATGAAACTGTATACAGAAGCTACCGATGGTTCTTCAATTGAAACCAAGGAGAGTGCCTTGGTATGGCACCATCAAGATGCAGACCCAGGCTTTGGATCCGGCCAGGCGAAGGAGATGTTAGATCATCTGGAGAGTGTGCTAGCTAATGAACCTGTTGCTGTGAAGAGCGGTCAATTCATCGTAGAAGTGAAACCTCAGGGAGTCAGCAAAGGCCTAGTTGCAGAAAAGATCTTCACATCAATGGCTGAGAATGGGAGGCAGGCTGATTTTGTGCTTTGTATTGGCGATGATAGATCTGACGAAGACATGTTTGAAATTATCGGTAATGCAATGACGAGGGACATGCTCTCCTTCAACACAGCAGTTTATGCTTGCACAGTCGGGCAGAAACCGAGCAAAGCCAAGTATTATTTGGATGACACAGTTGGGGTCATAACCATGCTTCAATCTCTTGCAGAAGTCTCTGATCCATCATCCACGACTGAAGCGGGAACTGGAAGCTCCCCTTGA 2574 0.4643 MLSRSYTNLLDLASGNFPAMGMGRERRRLPRVMTVPGIVSELDDDQANSVSSDVPSSIAQDRIIIVANQLPVKAKRRLDNKGWSFSWDEDSLLLQLKDGLPDDMEVIYVGSLKVDVDVSEQDDVSQILLDRFKSVPTFLPPDILSKYYHGFCKQHLWPLFHYMLPFSADHGGRFDRSLWEAYVYVNKLFSQKVIEVINPEDDYVWIHDYHLMVLPTFLRRRFNRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTIGIKIMPVGIHMGQIESLLSLADKEWRVGELKQQFEGKTVLLGVDDMDIFKGINLKLLAMEQLLKQHPKWQGRAVLVQIANPARGRGRDLEEIQAEIHASCKRINDEFRQPGYEPIVFIDRPVSVSERMAFYTIAECVVVTAVRDGMNLTPYEYIVCRQGASRPDLGSDSSSPRKSMLVVSEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMPDPEKQLRHEKHYRYVSTHDVAYWSKSFLQDMERTCRDHFRRRCWGIGLSFGFRVVALDSNFRKLSIDDIVSAYARAKNRAILLDYDGTVMPQTSINKTPSEEVISILNTLCGDLKNTVFIVSGRGRGSLGKWFSPCQKLGIAAEHGYFLRWSQDEEWEICGQNTDFGWIQIAEPVMKLYTEATDGSSIETKESALVWHHQDADPGFGSGQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGLVAEKIFTSMAENGRQADFVLCIGDDRSDEDMFEIIGNAMTRDMLSFNTAVYACTVGQKPSKAKYYLDDTVGVITMLQSLAEVSDPSSTTEAGTGSSP* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01218 857 FunFam Alpha,alpha-trehalose-phosphate synthase 316 529 - -
Eupl06g01218 857 NCBIfam trehalose-phosphatase 589 840 IPR003337 GO:0003824|GO:0005992
Eupl06g01218 857 CDD HAD_TPP 593 832 - -
Eupl06g01218 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Eupl06g01218 857 CDD GT20_TPS 62 545 IPR001830 GO:0003824|GO:0005992
Eupl06g01218 857 Pfam Glycosyltransferase family 20 62 545 IPR001830 GO:0003824|GO:0005992
Eupl06g01218 857 Gene3D Glycogen Phosphorylase B; 55 314 - -
Eupl06g01218 857 Gene3D - 720 852 IPR023214 -
Eupl06g01218 857 Gene3D - 591 696 IPR023214 -
Eupl06g01218 857 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 841 IPR001830 GO:0003824|GO:0005992
Eupl06g01218 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 55 314 - -
Eupl06g01218 857 Pfam Trehalose-phosphatase 595 828 IPR003337 GO:0003824|GO:0005992
Eupl06g01218 857 SUPERFAMILY HAD-like 592 840 IPR036412 -
Eupl06g01218 857 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 548 - -
Eupl06g01218 857 NCBIfam HAD-IIB family hydrolase 594 797 IPR006379 -
Eupl06g01218 857 Gene3D Glycogen Phosphorylase B; 315 529 - -
Eupl06g01218 857 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01218 Eupl-Chr6 20382172 20387200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01218 1 847 Trehalose Biosynthesis Gene Families AT1G06410 77.856 0.0 1379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01218 K16055 - rcu:8275177 1536.16