Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01197 ATGGTTTCCTTAGTCTTCTGCTTCTTCCTTTCAATTCTCTCTTTTCTTTTCTGGGTTTCATTGGCCCAAACTCAAACTGGTGTAATCACAAAAAACTCATCTGCTAGTATTACAGTGGAAATTAAAATGTCTGTTAAAAATATTTTCTACCTCAATTCAAGTGATCCCTCCACAACCACATGGTTCAACAACAATTCAATGAAATATAGTGTTTCATACGACGATGGCTCGGTGTTCGCAATTGGAAAACGCTCCCGCAACAATACAGATGAGCAAGTTGGCTTTCCAGGACTAGTTTGGTCAGCGAATAGATATAATCCAGTGAGGGAGAATGCAACGTTACAACTGATGCAAGATGGAGATCTAGTACTCCGAGATTCAGATGGCACCAAAGTTTGGTCGACTGATACGTCCGGTGAGTCTGTCTTAGGAATGAACATTACAGAAGTTGGAAATTTGTTGCTCTTTGATAATGATAATGAAATAGTGTGGCAGTCTTTTGATCACCCAACGGACTCGTTGCTTCTCGGGCAGAGATTAATTGAGGGTCAGAAGCTCATTGCAAGTGTCTCGGCTACCAATTGGAATCGTGGTTCGTACTATGCTACTTTCACATCTTCAGCTGGTTTTGCGGCATTCATCGAAGCGGATCGATCACTGATGTATTTTCAGTTGGTTCCGAATCAGAGTGCAAGGAGCACTGGACTAAACTATGCGCGATTCGATGGTCGACAAGGCCTTGTCTATAGAAATTATGAATGGCATGTAGATGGGGACTTGGTAGCTCAAGAACTGGGTGAATGTCAGTATCCTCGTCGCTGTGGGGACTATGGAGTCTGTAGAGAAGGGCAGTGTAGTTGCCCCAAGGGGCTAGATGGGGTGGAGTACTTCAAGGCAACACAAGGTCAATTACCGAACCTCGGATGCTCTAGAATTTCTCCCCTGTCATGCCAGAGTTCACTGGATCGTCACCGTCTTGTGGAATTTGGGAACCTTTCCTACTTCAATCTCATTGATTCAGACGCAGCTGTTCCAAGATTGAAAGATCTAGAAGGATGCAAACAGGCATGTTTGCAGAACTGTTCTTGCACTGCGGCCTTCTTCAAGTATGAGAGCAACATTTCTGATGGGTATTGCTATTTGCCCTCAGGCATCATGTCGATTAGAGGAGGGCAAATACCACACTACAACTTCACATCATCAGCATTCATCAAGGTACAGATTCCCTACACAGTTTCTCCCCCACCAGCATCAAGGGCGCGAACCAATTTAGTGGCAATAATAGCAGGGTCTATAGCTTCTTATCTAGTAGTCATTTGTCTGCTGATTAGTCTCTACATTGTTATTTCACGGAAGAAAAAAGTAGAGGAAGAAGGGGAGGAACTTATTAAGCAAGTACCAGGAATGCCTGTGAGGTTCTCATACGAAGCTCTGCATGCTGCGACGGAGGATTTCAAGGAGAAACTTGGAGGAGGAGGATTCGGGTCTGTGTTTAAAGGACTGCTAGGAGACGGCACTAGAATTGCAGTAAAACGGTTCGATAATATGGGCCAAGGGATGAAGGAATTCTTAGCAGAAGTCGAGATAATAGGTAGTATCCACCATTTCAATCTTGTGAGGAAGAACTTGGATCGTTCTCAGTCAGAATCTAGCTTACATCTACTCAGAATGTTGCAGAAGAAGGCCGAGGAGGACCGACTAATCGATATTATTGACAATTCATGCGAAGATATGCAATGCCATAGAGAAGAAGCCATGAGGATGATAAGGATTGCAGCATGGTGTTTGCAGGACGAACATACAAGAAGGCCTCCCATGTCTGTGGTGGTGAAGGTATTGGAGGGTGTAATGGAGGTGGACCCCAATATCAATTATCAGTTTTCCAATTCTATGGTCCCTCCTTTTGCGGTCAACACCCATGTTTCTCCAGCACCACAAGCATCGATTCTTTCTGCGCCTAGATGA 1965 0.4427 MVSLVFCFFLSILSFLFWVSLAQTQTGVITKNSSASITVEIKMSVKNIFYLNSSDPSTTTWFNNNSMKYSVSYDDGSVFAIGKRSRNNTDEQVGFPGLVWSANRYNPVRENATLQLMQDGDLVLRDSDGTKVWSTDTSGESVLGMNITEVGNLLLFDNDNEIVWQSFDHPTDSLLLGQRLIEGQKLIASVSATNWNRGSYYATFTSSAGFAAFIEADRSLMYFQLVPNQSARSTGLNYARFDGRQGLVYRNYEWHVDGDLVAQELGECQYPRRCGDYGVCREGQCSCPKGLDGVEYFKATQGQLPNLGCSRISPLSCQSSLDRHRLVEFGNLSYFNLIDSDAAVPRLKDLEGCKQACLQNCSCTAAFFKYESNISDGYCYLPSGIMSIRGGQIPHYNFTSSAFIKVQIPYTVSPPPASRARTNLVAIIAGSIASYLVVICLLISLYIVISRKKKVEEEGEELIKQVPGMPVRFSYEALHAATEDFKEKLGGGGFGSVFKGLLGDGTRIAVKRFDNMGQGMKEFLAEVEIIGSIHHFNLVRKNLDRSQSESSLHLLRMLQKKAEEDRLIDIIDNSCEDMQCHREEAMRMIRIAAWCLQDEHTRRPPMSVVVKVLEGVMEVDPNINYQFSNSMVPPFAVNTHVSPAPQASILSAPR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01197 654 FunFam serine/threonine-protein kinase PBS1-like 450 542 - -
Eupl06g01197 654 CDD B_lectin 99 170 IPR001480 -
Eupl06g01197 654 Gene3D - 46 208 - -
Eupl06g01197 654 ProSiteProfiles Bulb-type lectin domain profile. 58 168 IPR001480 -
Eupl06g01197 654 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 540 621 - -
Eupl06g01197 654 SUPERFAMILY alpha-D-mannose-specific plant lectins 97 207 IPR036426 -
Eupl06g01197 654 Pfam D-mannose binding lectin 98 185 IPR001480 -
Eupl06g01197 654 ProSiteProfiles Protein kinase domain profile. 483 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01197 654 SMART blect_4 46 170 IPR001480 -
Eupl06g01197 654 Gene3D Transferase(Phosphotransferase) domain 1 538 630 - -
Eupl06g01197 654 CDD PAN_AP_plant 314 406 - -
Eupl06g01197 654 Gene3D Phosphorylase Kinase; domain 1 446 537 - -
Eupl06g01197 654 ProSiteProfiles PAN/Apple domain profile. 317 400 IPR003609 -
Eupl06g01197 654 FunFam Os04g0303100 protein 88 222 - -
Eupl06g01197 654 SUPERFAMILY Protein kinase-like (PK-like) 465 540 IPR011009 -
Eupl06g01197 654 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Eupl06g01197 654 Pfam PAN-like domain 331 367 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01197 Eupl-Chr6 19855246 19857739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01197 395 600 Receptor kinase-like Gene Family AT3G59750 35.780 2.11e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl06g01197 B_lectin 1.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01197 - - vvi:100262615 535.028