Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01189 ATGGATCCTTTGAAACTAGTTGAAATTGGGATGGCGATGGTGCCACCTATGTTTAAACAAGTAAATTATGGATGGAGCCTTGAAGAAAATATGAAAATTTTGGAAGACAAAATGGAAGAGCTGAAGAGCAGAGTGGAAGATATAAACACTGAATTGAATCAAGCTGAGGTTCAGCCAGGAAAAAAGCGAAAGAGAGAAGTTGAAGTTTGGCAAGAAAGGGTGCAGAGAATTACGACTGAAGTGGATGAGGTAAAAAGGAAATATAGTGAAAGGAGCTCTCTCCTACCTGATATAAAATTGGGAAAGCTTGTTGATAAAAAGATCAAAGAAGTTACTAAGCTTCAAGATAAAGGCAGCTTTTCTGATGGACTGATAGTTGATCACATAAACCATGGACTGACATTTCCAACAACACAATTGGTCGGTGTAACAGCTGAGAAAAACTTCAAAAAAATCTGGAAGGCCTTGATGGACAGTGAGATCAACACAATTGGTTTATCTGGAATGGGGGGAGTTGGCAAGACAACCATCATGACCCATATCAATAATCAATTGAAAGACAGTGGTCATTTTGATGTTATAATTTGGGTAACTGTATCGAAAGCATTGAATCTTAATAGATTACAAAATGACATTGCCAAAGCAATAAAGTTAGATTTTTCTAATGATAGAGATCCAAGAATAAGGGCAGCCGAATTGCAAGTAGCATTGAACCGAAGGAAGAGGTTTGTGCTCATCTTAGATGATATATGGAAAGTGTTTCCTCTGGAGGAGGTAGGTATTCCCATACCATCTAGAGAAAATGAATGCAAGTTAGTATTAACTACTCGATCATCTGAAGTATGTCGAGGGATGCAATGCCAAAAAGAAATTAAAGTGGAGGTTCTCTTAGAGGAGGAAGCTTGGAACTTGTTCATGGATAAAGTTGGATGTCAAAAGATGCTTGCTCCTGAAGTAGAAGAAATTGCAAGGCTTGTTGCCCAGGAATGTGCTGGTTTGCCTCTTACAATTGTCACGGTAGGTGGAGCAATGAGTAGAGTAGAAGGCATTCACGAATGGAGAAATGCATTATATGAATTGAAAAGTTCGACAAAGGGGGTGAGGAAGTTGAAAGATAAGGTCATTGAACGTTTGAGATTCAGTTATAATCGCTTGAGAGATGAAAAGCTCAAGAATTGTTTCTTATGTTGTGCATTGTATCCTGAAGATTATGACATCGAGGTGAAAGAGTTGATAAATCTTTGGATTGCTGCGGAGTTCATAGATGATCAAAGGAATAGGGAGGAGAAGTTTGACAGCGGTCACGTTATTTTGGATATATTGATAAACAATTGCATGATTTTGCAGAGTACTGATCCTATTGAATGTGTAAGGATGCATGATTCGGTTAGAGACATGGCCCTTGATATCACAAATGTGAGGCCTAGATTCCTGGTCAAAACTGGTGATCAGTTGATAATAAATGAAGAGGAATGGAGAGAAGATCTTGAGAGAGTTTCTTTAATCAGAAATGGTATAAAGGAGCTTTCGTATACACCCAGGTGCCCCAGACTCACTACTTTGCTACTGCAACAAAATCATATATTGAATACGATCTCAGATTCATTCTTTGAGCACATGCGTGGCCTCAAGATTCTTGATCTATCTTATACTGGAATTGAGTATCTGCCAAATTCTGTATCAAACTTGAAGAATCTCCGTGCACTTCTCTTACATGGTTGCGAAGATTTAACTGATGTGACTTCGGTTGCAGATCTTACAGAATTGAGGGAGTTGGACCTCTATGGTACTGGAATCGAAGAAGTGCCTCAAGGCATGGGAAGGTTGGTCAACCTCAGACGCCTTAGTATCACTAATATCGACGACCTAAGAATGTTGGGGAGTAAATTTATATCCATGCTTTCCTTTCCTGGTTTTCCTTTTGAAGGGAGAACGAACATGGTGGAGGAACTCAGCAACTTTACACACTTAGAAAGTTTGCATGCCACTTTTTTCGAATTGCTTGCTTTTAATAAATATGTCAGGTCTGAGCATATGCAAGGGTTGAAGAACTTCGGTTTCACCGTAGGGGATGATGAAGAACCGTATATTAGTGAAGAAGTGATGGGGAATTTTGTAGCGGTATGCAAAGTTGATATTGTTAACGTAATTAACTCCCTTGTGCTCCCTTGCAACACCCAAGAGTTGTGTATTGAATTGTGCGAGGATCTCACTAGGTTATCGGAATTGGATTGCTTAAAGAATGTAAGAGATTTGAAACGGTGTAAGCTACGTTGGTGCATAGGGATAGAGTGCATATTGTCAGTAGAAGAAGAAGTGGGCCCATCGTTATTACCAAGCCTTGAGTATCTGTCTCTTATTGGCTTGGACAAGTTAAGTGCACTCTGTAAGGGAGTTGTGCCACGAGGCACCCTTTCTAGTTTAAAGCACCTGAAAATGCATGAGTGTAAAACTATGAAGTATCTGTTCTCGCCTGGGTTGTTACAGAACCTCCAAAACCTTGAGTTTGTTGATGTCAGTTATTGTGAGCAGATGGAGGAGATAATAGCAGAAGAAGAGATGGGTGAAGGGAACAACAATACCATCACACTTCCAAGGTTGAAGGATTTGTGCTTATATGATCTACCGGAATTGAAGAGCATTTGGAAGGGGTTAATGGTTTGTGATTCTATACAGACTATTGATGTATATGAATGTGACGTGCTGAAAAGGCTTCCTCTCTCTATGGAAATGGAAAGTAGAGGACAACCACCACCACTACCTGCTCTCAGAGTAATCAGAGGACACAAAGAGTGGTGGGATTCGCTGGAGTGGGACCATCCCAACGACAAAACCCTCCTTCAACCCTTCTTCAAAGAACCATTGGATTATAGGATTTTAATTGAATTCGGATCTTTATGA 2901 0.3992 MDPLKLVEIGMAMVPPMFKQVNYGWSLEENMKILEDKMEELKSRVEDINTELNQAEVQPGKKRKREVEVWQERVQRITTEVDEVKRKYSERSSLLPDIKLGKLVDKKIKEVTKLQDKGSFSDGLIVDHINHGLTFPTTQLVGVTAEKNFKKIWKALMDSEINTIGLSGMGGVGKTTIMTHINNQLKDSGHFDVIIWVTVSKALNLNRLQNDIAKAIKLDFSNDRDPRIRAAELQVALNRRKRFVLILDDIWKVFPLEEVGIPIPSRENECKLVLTTRSSEVCRGMQCQKEIKVEVLLEEEAWNLFMDKVGCQKMLAPEVEEIARLVAQECAGLPLTIVTVGGAMSRVEGIHEWRNALYELKSSTKGVRKLKDKVIERLRFSYNRLRDEKLKNCFLCCALYPEDYDIEVKELINLWIAAEFIDDQRNREEKFDSGHVILDILINNCMILQSTDPIECVRMHDSVRDMALDITNVRPRFLVKTGDQLIINEEEWREDLERVSLIRNGIKELSYTPRCPRLTTLLLQQNHILNTISDSFFEHMRGLKILDLSYTGIEYLPNSVSNLKNLRALLLHGCEDLTDVTSVADLTELRELDLYGTGIEEVPQGMGRLVNLRRLSITNIDDLRMLGSKFISMLSFPGFPFEGRTNMVEELSNFTHLESLHATFFELLAFNKYVRSEHMQGLKNFGFTVGDDEEPYISEEVMGNFVAVCKVDIVNVINSLVLPCNTQELCIELCEDLTRLSELDCLKNVRDLKRCKLRWCIGIECILSVEEEVGPSLLPSLEYLSLIGLDKLSALCKGVVPRGTLSSLKHLKMHECKTMKYLFSPGLLQNLQNLEFVDVSYCEQMEEIIAEEEMGEGNNNTITLPRLKDLCLYDLPELKSIWKGLMVCDSIQTIDVYECDVLKRLPLSMEMESRGQPPPLPALRVIRGHKEWWDSLEWDHPNDKTLLQPFFKEPLDYRILIEFGSL* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01189 966 Gene3D Ribonuclease Inhibitor 481 686 IPR032675 -
Eupl06g01189 966 Coils Coil 24 58 - -
Eupl06g01189 966 Gene3D Ribonuclease Inhibitor 746 914 IPR032675 -
Eupl06g01189 966 FunFam Probable disease resistance protein At5g66910 295 381 - -
Eupl06g01189 966 Pfam Leucine rich repeat 516 574 IPR001611 GO:0005515
Eupl06g01189 966 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 26 906 - -
Eupl06g01189 966 Gene3D - 126 295 IPR027417 -
Eupl06g01189 966 SMART LRR_typ_2 515 539 IPR003591 -
Eupl06g01189 966 SMART LRR_typ_2 540 563 IPR003591 -
Eupl06g01189 966 SMART LRR_typ_2 586 609 IPR003591 -
Eupl06g01189 966 Pfam NB-ARC domain 146 383 IPR002182 GO:0043531
Eupl06g01189 966 FunFam Probable disease resistance protein At1g61300 128 290 - -
Eupl06g01189 966 PRINTS Disease resistance protein signature 330 344 - -
Eupl06g01189 966 PRINTS Disease resistance protein signature 163 178 - -
Eupl06g01189 966 PRINTS Disease resistance protein signature 829 845 - -
Eupl06g01189 966 PRINTS Disease resistance protein signature 237 251 - -
Eupl06g01189 966 Coils Coil 67 87 - -
Eupl06g01189 966 Gene3D - 296 386 IPR042197 -
Eupl06g01189 966 FunFam Probable disease resistance protein At1g63360 382 469 - -
Eupl06g01189 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 397 IPR027417 -
Eupl06g01189 966 SUPERFAMILY L domain-like 459 908 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01189 Eupl-Chr6 19699613 19736813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01189 160 570 WRKY Transcription Factor Family AT5G45050 20.941 6.01e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01189 K13459 - msin:131235532 798.505