Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01181 ATGGCTCATCAGATACAAAATGGGCAAGGAACCAGTGAAAATTCATCAAGTCCAGTTAATCTGGTTGCAACTGATACTATGATTGTGGTCAGATCTGCAGAAGCTGAAAGTGTTAGTGGAGAAGATGGAGGAGTTTCGAAAGCTAAGGCCAATGTATTGGAGACGAATAAGGTAACCATGGATGAGCTTAAAGTGAATGTCCCTGAACCAGAGAGACATACTCGTATCATTGATATTAAATGCAATCATGAAGCATTGAATATAGAAAATTGGGATGGAGAGAAGGTTTGCAGAATCTGTCATTTGAGTGCTGATCGCGCATCCGAAACATCGGATCTGATCCAGCTTGGTTGCGGCTGTAAGGGTGAACTTGGTTACGTACATCGTCACTGTGCCGAAACCTGGTTTAATCTAAAAGGCAACAGATGTTGCGAAATCTGCGACGAGGTTGCGAAAAATATAACTGGTGTGAGGGACAACAGATTCATGGAGGAATGGAATGAGAGGAGTCTAATGCGTAGCAGTAGCCACTCCTCAGACAGGATGGGAGGATTCTGGTGGGCGCAGCCATTTTGTAACTTCCTCATGGCATGCCTGGCATGCCTGCCATGCAGGAATAGGAGCTGCATGAGGTTGTGCAGTAAGGTTATTGCTGGGCTGTCATGGGTGTGGTCATGA 678 0.4543 MAHQIQNGQGTSENSSSPVNLVATDTMIVVRSAEAESVSGEDGGVSKAKANVLETNKVTMDELKVNVPEPERHTRIIDIKCNHEALNIENWDGEKVCRICHLSADRASETSDLIQLGCGCKGELGYVHRHCAETWFNLKGNRCCEICDEVAKNITGVRDNRFMEEWNERSLMRSSSHSSDRMGGFWWAQPFCNFLMACLACLPCRNRSCMRLCSKVIAGLSWVWS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01181 225 MobiDBLite consensus disorder prediction 1 20 - -
Eupl06g01181 225 SMART ringv_2 96 148 IPR011016 GO:0008270
Eupl06g01181 225 SUPERFAMILY RING/U-box 93 150 - -
Eupl06g01181 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 157 IPR013083 -
Eupl06g01181 225 ProSiteProfiles Zinc finger RING-CH-type profile. 89 154 IPR011016 GO:0008270
Eupl06g01181 225 PANTHER ZINC FINGER, RING-CH-TYPE 38 199 - -
Eupl06g01181 225 Pfam RING-variant domain 97 147 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01181 Eupl-Chr6 19601262 19611043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01181 94 200 C3H Transcription Factor Family AT5G05830 41.593 3.87e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01181 - - ming:122082795 248.44