Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01174 ATGGCGGATAAGAAGAAGGAGAGTCAAGCCCTGTTGCTCGGGCGGTACGAGATAGGGAAGCTCCTTGGCCATGGAACTTTCGCGAAGGTCTACCACGCCAGAAATGTGAAATCTGGCGAGAGCGTCGCGATCAAAGTTCTCGACAAAGAGAAGATCCTCAAAGGAGGTTTGATTGCTCACATAAAGCGCGAGATCTCGATCTTACGCCGCGTTCGGCACCCGAACATCGTTCAGCTCTTCGAAGTCATGGCGACGAAAACGAAGATCTATTTCGTGATGGAGTATGTTAAAGGAGGTGAACTATTCAAGAGAGTGGCCAAAGGACGGTTGAAAGAGGAGGTTGCGAGGAAGTATTTCCAGCAATTGATCTCCGCTGTCGAATTCTGTCACGCGAGAGGGGTTTATCACCGCGATCTCAAGCCAGAGAACCTATTATTAGACGAGAATGGCGATCTCAAGGTCTCAGATTTCGGTCTGAGTGCTGTATCGGATCAAATCAGGCAAGACGGCCTCTTTCACACCTTCTGTGGAACGCCTGCTTACGTTGCGCCTGAAGTTCTAGCCCGAAAGGGCTACGATGCAGCGAAGGTCGATCTCTGGTCCTGCGGTGTGATTCTGTTCGTTTTGATGGCTGGATACCTTCCTTTCCAGGATCAGAACATCATGTTGATGTACAAGAAGATATACAAAGGCGAATTCCGGTGTCCTCGCTGGTTCTCCCCTGAACTTACTCGTCTTCTAACACGCCTCCTGGACACGAATCCGGAGACTCGAATTACATTTCCAGAAATCATGGCGAACAAATGGTTCAAGAAAGGATTCAAACACGTTAAATTCTACATCGAAAACGATCGTTTCTTCAGCATCGAAGACGACAATGACGACGTAGAATCATCTGTTTCAGAGACTGAGTCTGAGCCGGAGATCCAGAGACGACCTCTCGGGTTACCAAGACCAGCGAGCTTAAATGCGTTCGACATCATTTCCTTTTCACCCGGTTTCGATCTCTCCGGATTGTTCGAAGAAACAGGGGAGGAATCAAGATTTGTCTCTGGTGCTCCGGTTTCAAATATTATATCAAAATTGGAGGAAATCGCAAAGGTGGTTAGTTTCACAGTGAGAAAGAACGATTGTAGAGTGAGCTTGGAGGGTTCGAGAGAAGGCGTGAAGGGGCCATTGACGATAGCAGCGGAGATATTCGAATTAACGCCGTCATTGAGAGTGGTGGAGGTGAAGAAGAAAGGAGGTGACAGAGGAGAGTACGAGGAGTTCTGTAACCGAGAATTGAAGCCTGTGTTGCAGAACCTTGTGGTCGATGAATCTGCTGCCTCACATCTTCCTTCAGATACTGAATAG 1356 0.4816 MADKKKESQALLLGRYEIGKLLGHGTFAKVYHARNVKSGESVAIKVLDKEKILKGGLIAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVKGGELFKRVAKGRLKEEVARKYFQQLISAVEFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDAAKVDLWSCGVILFVLMAGYLPFQDQNIMLMYKKIYKGEFRCPRWFSPELTRLLTRLLDTNPETRITFPEIMANKWFKKGFKHVKFYIENDRFFSIEDDNDDVESSVSETESEPEIQRRPLGLPRPASLNAFDIISFSPGFDLSGLFEETGEESRFVSGAPVSNIISKLEEIAKVVSFTVRKNDCRVSLEGSREGVKGPLTIAAEIFELTPSLRVVEVKKKGGDRGEYEEFCNRELKPVLQNLVVDESAASHLPSDTE* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01174 451 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Eupl06g01174 451 FunFam Non-specific serine/threonine protein kinase 5 310 - -
Eupl06g01174 451 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Eupl06g01174 451 FunFam Non-specific serine/threonine protein kinase 319 437 - -
Eupl06g01174 451 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 431 - -
Eupl06g01174 451 Gene3D Transferase(Phosphotransferase) domain 1 5 313 - -
Eupl06g01174 451 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01174 451 CDD CIPK_C 323 434 - -
Eupl06g01174 451 Gene3D Kinase associated domain 1, KA1 319 439 - -
Eupl06g01174 451 FunFam Non-specific serine/threonine protein kinase 7 95 - -
Eupl06g01174 451 SUPERFAMILY Protein kinase-like (PK-like) 12 325 IPR011009 -
Eupl06g01174 451 Pfam NAF domain 319 375 IPR004041 GO:0007165
Eupl06g01174 451 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01174 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Eupl06g01174 451 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01174 Eupl-Chr6 19483288 19484643 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01174 1 451 CBL-interacting serine-threonine protein kinases AT4G18700 78.288 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Eupl06g01174 Pkinase 1.9e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01174 - - ming:122067330 784.637