Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01172 ATGGACAAGAATGGGAACATCTTGATGCAGAAGTACGAGCTCGGTCGGATGCTTGGCCAAGGGACATTTGCAAAGGTCTACCATGCAAGGAACCTAAGATCAGGCCAAAGCGTAGCAATTAAGATAATTGACAAGGAGAAGATCCTCAGGGTCGGGATGATTGATCAAATCAAGAGAGAAATCTCCGTGATGCGTCTCGTTCGACACCCAAATGTCGTTCAGCTTTACGAAGTCATGGCTAGCAAAACCAAGATCTATTTTATCATGGAATACGTAAAGGGTGGAGAGCTTTTCGACAAGGTCGCTAAAGGGAAGCTTAAGGAAGACATTGCACGCAAGTATTTCCAACAATTGATCGGTGCCATTGATTTCTGCCATAGTCGAGGGGTCTACCACCGTGATCTAAAGCCTGAGAATCTCCTTCTTGATGAGAATGGAAATCTCAAGGTTTCAGACTTTGGTCTGAGTGCTCTATGTGAGTCACAGAGGACAGATGGTCTCCTTCATACGACATGTGGGACGCCGGCCTATGTTTCACCGGAAGTAATTAACAGGAAAGGTTACGATGGTGCAAAAGCTGACATATGGTCATGTGGGGTTGTTCTCTTTGTTCTAATGGCTGGCTATCTTCCTTTCCATGATTCAAATCTCATGGGTATGTATAGAAAGATAAGCAAAGGAGAATTCAAGTGCCCACAGTGGTTTTCGCCCGAGCTTCGAAAGCTTCTCTCAAGAATCCTCGACCCAAATCCAAGCACAAGAATCACTGTAGCTGAGCTCATGGAGAATTCATGGTTTAAGAAGGGATTTAAACCAGTTGAGGACATTAAACCCCAACAAGAGGAAAGGGCTATTAGTCTTGTGGATATCCAAGCTGCCTTTGCATCTACTTCTGAGGATAGTCAGGAGAATTCCATGAAACCTACATGTTTGAATGCATTTGATATCATATCTCTATCTCCTGGATTCAATCTATCAGGTTTATTTCAGAAGGAGAGTGATCATAATTCAGAGGCTAGGTTCACAACGACAAAACCCGCGTCGATAATCATATCGAAGTTGGAGGAAATTGCGGAGATGGAGAGGTTTAAGGTGAAGAAGAAGGATGGACTGGTGAAGTTGCAAGGCAGCAAGGAAGGAAGAAAGGGACAGCTTGCCATTGAAGCGGAAATCTTCGAGGTTACACCTTCATTTCATGTGGTGGAAGTGAAGAAAGCGGCAGGTGATACTTTGGAGTATCAGAAGTTCTGTGACCAAGAGTTGAAACCTTCTCTCAAGGATATTGTATGGACTTGGCAAGGAGGTGAACAGCAACAGCAGCAGCAACCACAACCTGCTTAG 1341 0.4437 MDKNGNILMQKYELGRMLGQGTFAKVYHARNLRSGQSVAIKIIDKEKILRVGMIDQIKREISVMRLVRHPNVVQLYEVMASKTKIYFIMEYVKGGELFDKVAKGKLKEDIARKYFQQLIGAIDFCHSRGVYHRDLKPENLLLDENGNLKVSDFGLSALCESQRTDGLLHTTCGTPAYVSPEVINRKGYDGAKADIWSCGVVLFVLMAGYLPFHDSNLMGMYRKISKGEFKCPQWFSPELRKLLSRILDPNPSTRITVAELMENSWFKKGFKPVEDIKPQQEERAISLVDIQAAFASTSEDSQENSMKPTCLNAFDIISLSPGFNLSGLFQKESDHNSEARFTTTKPASIIISKLEEIAEMERFKVKKKDGLVKLQGSKEGRKGQLAIEAEIFEVTPSFHVVEVKKAAGDTLEYQKFCDQELKPSLKDIVWTWQGGEQQQQQQPQPA* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01172 446 Gene3D Transferase(Phosphotransferase) domain 1 92 272 - -
Eupl06g01172 446 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Eupl06g01172 446 CDD STKc_SnRK3 11 265 - -
Eupl06g01172 446 SUPERFAMILY Protein kinase-like (PK-like) 8 304 IPR011009 -
Eupl06g01172 446 CDD CIPK_C 312 426 - -
Eupl06g01172 446 FunFam Non-specific serine/threonine protein kinase 306 430 - -
Eupl06g01172 446 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01172 446 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Eupl06g01172 446 FunFam Non-specific serine/threonine protein kinase 2 307 - -
Eupl06g01172 446 Pfam NAF domain 308 367 IPR004041 GO:0007165
Eupl06g01172 446 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 426 - -
Eupl06g01172 446 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01172 446 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01172 446 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Eupl06g01172 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Eupl06g01172 446 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Eupl06g01172 446 Gene3D Kinase associated domain 1, KA1 305 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01172 Eupl-Chr6 19473570 19475219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01172 1 434 CBL-interacting serine-threonine protein kinases AT5G45820 71.167 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Eupl06g01172 Pkinase 2.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01172 K07198 - msin:131245402 726.472