Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01171 ATGGCAAGCTGCGATCGAGATCGATTCCATCGCTGTTTTCAGAACTGGATCACCCAACAAGAAGGAGACCTCGATGAACTCCTCCAAACATTGAGCGAAGATGCCGGAGACACCGAGAAGCTCCGCCTTGTTGCCGAAAGGAACGTCGAACACTTTCAAGAATACTACGAGAAGCGAATCGTCCTCGCACAAGACGACGCTACGTCCTTCTTCTCACCCACCTGGTGCACCTCTTTGGAGAATTCGTTCCTCTGGATAGCCGGGTGCAGACCTTCCTTAGCCATCCGACTCGTTTACACCCTCTGCGGCTCAAAACTCGAGGCACAACTCGCTGAGTTCCTGCAAGGCGTGAGGAGGGGTAACCTGGCTGAGCTCTCGGCTAGCCAACTCGGTCTTGTTAATGACCTCCATTGCAGGACTGTTCGAGATGAGGAGAAGCTATCGAGCCGGATGGCGAGTTTGCAAGAGGATATCGCGGACCACCCACTAGCTCTTATAGCCAATGAGTCGAGTCGAGTCGGTGAGTCAAATGGGCAGGTGGACCGAGCTATCGATACACACACGCTAGCCTTGGCTAGTATCTTGGAGGAAGCAGATAAGCTGAGACTGAACACCTTGAAGGAGCTGATCAACATTCTCACACCATTGCAGGCCGTTGATCTTCTGGTGGCCACTAAGAAGCTTCACCTCTCTATGCACGAGTGGGGCAAAAGAAGGGATCGTCAACACGCACACGCAAGTACTTAG 747 0.5274 MASCDRDRFHRCFQNWITQQEGDLDELLQTLSEDAGDTEKLRLVAERNVEHFQEYYEKRIVLAQDDATSFFSPTWCTSLENSFLWIAGCRPSLAIRLVYTLCGSKLEAQLAEFLQGVRRGNLAELSASQLGLVNDLHCRTVRDEEKLSSRMASLQEDIADHPLALIANESSRVGESNGQVDRAIDTHTLALASILEEADKLRLNTLKELINILTPLQAVDLLVATKKLHLSMHEWGKRRDRQHAHAST* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01171 248 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
Eupl06g01171 248 ProSiteProfiles DOG1 domain profile. 6 242 IPR025422 GO:0006351|GO:0043565
Eupl06g01171 248 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01171 Eupl-Chr6 19458632 19459378 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01171 16 224 bZIP Transcription Factor Family AT5G06950 27.962 7.59e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01171 - - nnu:104609806 350.903