Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01170 ATGAAGAGCCAAGTGCAGGTGAGTTTCTCTGACTTCTTTGAGAAATGGCTACTTCAGCATGAAGCGAACCTTCAACAACTCCTCTCTGTTCCAAGAGACCCATCTCATGAGCCAGAACATCGAGCCTTGGTCTCTAAAGTCATGAACCACTACAAAGAATACTACACTGCCAAATGGGCTGGAGCCCACGACGACGTTCTCGGTTTCGTCTCTCCCCCATGGTTCAGCCCTCTGGAAAATGCTTATCTTTGGATGACGGGTTGGAAACCATCCTTGGTTTATCGACTCGTTGACTCATTGAGACATGCTCAAGTCCCTAGTGCGAGTCTCACAAACCTGTCTGAAGAGCAATTGAAGAAGATTGAAGAGTTGCAGTTGCGGACGAGCAAGGAAGAAGAGGTGGTGGAAAGGGAAATGGAGAGGCAGCAAGTATCCATTGCAGACCGGCGGATGCTGGACTTGGCCCGATTCGCGAGCGGGGTCAGAAACAGTGAGGTTGTCGGCGAGGTGGATGTGTTGGTGGAGACGGCTTTGAAGAAGTTGCTGGCTGGGTTGGAGCGAGTCATAAAGACTGCGGATTGCGTTCGGTTAAAGGCTTTGAAGGGGGTGATGGAGTTACTTACACCCCTACAATGTGTGGACTTCGTCGCTGCTGCGTCAATGCTGCAAATCCAGCTCTTTAAGGGTGTTGTGGGTGAAAATCCGGAATGTAGTTGTCGATTGATCCTCGAGATTCACACCCACCTCCTCAAGATAAAGGAGATGGATCCAACATATAGAAGAGTTGGAAATGAGAGAAAAGAAAGAAGAAGAGTCCAGACCCACCAGTCTAACCTCACTTGTTACTCCGTCTCGTCTCGGAAGATGAACCAGCCAATGTGTTTCCATCGCTTCTACGAGATATGGCTCCACCACCTCCGCCTTCTCCTCCACCAACTCGCCTCCGCTCCCAAGCCCAGCAACGGTGAAGACCAACAATACCTAGGCCAACTAGTTGACCGAGTCATGACTCACTATGATGACTACTACCGAGTCAAGACCCACACTGCGAAGGACGACGCGTTACTAATGTTCACCGCCTCGTGGGCAACATCTCTCGAGCGCTCGTTGCACTGGATTGCTGGGTGGAGACCCACCACCATCTTCCATCTCGTGTACACCGAGTCAAGCGTCCGTTTCGAGGCCCGACTCGTCGATCTCCTCCGCGGAATCCCAACTGGCGACCTCGGAGACCTTTCTCCCAGTCAACTCGGACGAGTCAGTGAGTTGCAATGCGAGACGGTGACGGAGGAGAATGAGATAACCGCCGAGATGGCCAATTGGCAGGAGAATATGTGCGATCTCGTACCGTTGTCCGCTGATAAGGAACCGAAGATCGAACGGCTGGTGAAGATTCTGAAGAGAGCAGATGACCTACGGCTGAAAACGATCAGAAAAGTGGTCGAGATTTTGACCCCACAGCAGGCCGTCGAATTCTTAACAGCAGCGGTCGAGTTGCAGTTTGGCTTTCGTGGGTTGGGATTGGACAAAGACCACAGGCGTGGAAACATGTGA 1554 0.5161 MKSQVQVSFSDFFEKWLLQHEANLQQLLSVPRDPSHEPEHRALVSKVMNHYKEYYTAKWAGAHDDVLGFVSPPWFSPLENAYLWMTGWKPSLVYRLVDSLRHAQVPSASLTNLSEEQLKKIEELQLRTSKEEEVVEREMERQQVSIADRRMLDLARFASGVRNSEVVGEVDVLVETALKKLLAGLERVIKTADCVRLKALKGVMELLTPLQCVDFVAAASMLQIQLFKGVVGENPECSCRLILEIHTHLLKIKEMDPTYRRVGNERKERRRVQTHQSNLTCYSVSSRKMNQPMCFHRFYEIWLHHLRLLLHQLASAPKPSNGEDQQYLGQLVDRVMTHYDDYYRVKTHTAKDDALLMFTASWATSLERSLHWIAGWRPTTIFHLVYTESSVRFEARLVDLLRGIPTGDLGDLSPSQLGRVSELQCETVTEENEITAEMANWQENMCDLVPLSADKEPKIERLVKILKRADDLRLKTIRKVVEILTPQQAVEFLTAAVELQFGFRGLGLDKDHRRGNM* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01170 517 Coils Coil 121 141 - -
Eupl06g01170 517 ProSiteProfiles DOG1 domain profile. 292 513 IPR025422 GO:0006351|GO:0043565
Eupl06g01170 517 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 295 516 - -
Eupl06g01170 517 ProSiteProfiles DOG1 domain profile. 6 236 IPR025422 GO:0006351|GO:0043565
Eupl06g01170 517 Pfam Seed dormancy control 24 98 IPR025422 GO:0006351|GO:0043565
Eupl06g01170 517 Pfam Seed dormancy control 310 387 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01170 Eupl-Chr6 19442333 19448259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01170 290 495 bZIP Transcription Factor Family AT5G06950 22.422 8.71e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01170 - - nnu:104611565 318.546