Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01169 ATGCATTTGGCCCATCAAGCAATGGGAGGTAGATGGAAACTTTTCGGATTCCAGCTTCACATGCTGTTTTGTCTTTTGGACTTGATGGTTCTCTTCCAAATTCACAAATGTTGGTCGCTTAATCTTGAAGGATTGGATTTGTTGGAATTCCGGGCAAATGTGGATAGTGATCCTTATGGTGCCTTCACGAATTGGGACCCTAATGACAGCGACCCGTGTATGTGGTCAGGTGTTCACTGCGTGGACAGTAAAGTGCAAATGCTGGATCTAAAAGGGTTTTCTCTGGGAGGAGTACTGGCACCTGAGCTTGGGAAACTTACCCATTTAAGATCTCTTATCCTCTACAAGAACCACTTTTCGGGTGTCATCCCCAAAGAGATTGGAGGGCTTACCATGCTGGAGCTATTGGACTTGAGGAGTAATAACTTAACTGGAACCATTCCAGCAGAAATTGGTCAGATGCTGACACTGAAGCGCCTGCTGCTTAGCGACAATAAATTCCAGGGCAGTATTCCTCCCGAGTTTGGGAAGCTCAATTTGCTCTCAGAGATCCAATTCGACCAAAACCTTACTTTTTCTGTTGCAACTAATAGAAAATTTGGACATTGCATCTGGCAGAGCACTTTGAAACAACTGAAGGAGGCAGACTCATTCAGGATCCTGATCAAAGGGAAACTTCTACAGTATCTTGATTTATTGCCACTGTTCAACTTCAGTAAGGGCTCTTCACACTGCCATGGAGAGAAATGCTGTGATAATTCACTGAATTTAGCTGAACCATACATAGTACAAAATGTACAGCACATAGTAAATTTTGTACGTCGTAGACTGCTTCAAGAATTCAGCAACCTCCCCGCTGCACCAGTGAGCAATGGTGCCCTCCTTGAACAGATGATTACTATTCCATCTACCCGAAGTAGTGGATCTTTCCCTGCAATACCAAATGGCAAGAAGAAACAATTTCCTCCACCTTCATTGCTGCCTTCTCCCACGAATCCTCCCCTGCACCAATCTCCTAGTACTTTGGACCATGAACCTCAGTCTTCCAAAACTCCCGCTGCTTCCCTTGGAAAGCCAACTGAGCAGCAACCAGTAGCTGATGGTTCATTTGGAAAGAGATGGAAGTATGTTTTCGTGGTTCCTGGTGTTGCTTTCCTTCTCACTGCTGCTGTGGCGTTTCTCTTTGTGTGTCGGAGCCAAGGAGTCAAGACCATCAGTACTTGGAAGACTGGACTGAGTGGCCAGTTGCAGAAGGCATTTGTCACAGGGGTGCCCAAGCTGAATCGTTCAGAGCTAGAAACTGCCTGTGAGGATTTCAGCAATATCATTGATACTCTTGCAGACTGCACGGTGTTCAAGGGAACACTGTCGAGTGGAGTTGAGATTGCGGTTGCATCAACTGCAACTGCATCCATAGATTGGTCGAAGCGCTCCGAAACGGCATACAGGAAAAAGATTGCTACATTGTCACGGGTGAACCACAAGAACTTTGTCAATCTTTTGGGATACTGCGAAGAGGATGAACCTTTTGTCAGGATAATGGTGTTTGAGTATGCTCCCAATGGGACACTCTTTGAGCATTTGCATGTTAAAGAAGTCGAACATCTCGACTGGAATGCTAGGATGAGGATTATTATGGGAATAGCTTACTGTCTTCAATACATGCACCATGACCTGAATCCACCTGTAACACATCCCAATCTTCAGTCCAATGCTGTCTATTTGACAGACGATTATGCTGCTAAGATTGCAGAAATCAGTTTCTGCACAGGTGTTGCAGCCAAATCAAAGATTTCCGGTGAAGATGAAAGGAAGCATTTTGAACTTCGGCCGTTTGCAGGCCATGAAACAAATGTCTACAGTTTTGGAATATTGTTGCTAGAAATCATTTCTGGGAAGCTACCATACTCTGAAGAAAAAGGGTCGCTTGTGAACTGGGCTGTCGACTATTTGAGTGATAACCGGAGCATTAGCTACTTGATTGATCCCACACTCAAGTCCTTCAAGGACAACGAGCTTGACATCATCTGTGAGGTCATCCAGGAGTGCATCCATCAGGATCCAAGGGAGAGACCAACAATGAGGGAGATCACCACGAAACTGAGGGAAGTGATTGCTATCTCACCTGATGGAGCATCCCCAAAACTTTCTCCACTATGGTGGGCGGAACTCGAGATCCTCTCGGTGGAGGCTAGTTAA 2199 0.4538 MHLAHQAMGGRWKLFGFQLHMLFCLLDLMVLFQIHKCWSLNLEGLDLLEFRANVDSDPYGAFTNWDPNDSDPCMWSGVHCVDSKVQMLDLKGFSLGGVLAPELGKLTHLRSLILYKNHFSGVIPKEIGGLTMLELLDLRSNNLTGTIPAEIGQMLTLKRLLLSDNKFQGSIPPEFGKLNLLSEIQFDQNLTFSVATNRKFGHCIWQSTLKQLKEADSFRILIKGKLLQYLDLLPLFNFSKGSSHCHGEKCCDNSLNLAEPYIVQNVQHIVNFVRRRLLQEFSNLPAAPVSNGALLEQMITIPSTRSSGSFPAIPNGKKKQFPPPSLLPSPTNPPLHQSPSTLDHEPQSSKTPAASLGKPTEQQPVADGSFGKRWKYVFVVPGVAFLLTAAVAFLFVCRSQGVKTISTWKTGLSGQLQKAFVTGVPKLNRSELETACEDFSNIIDTLADCTVFKGTLSSGVEIAVASTATASIDWSKRSETAYRKKIATLSRVNHKNFVNLLGYCEEDEPFVRIMVFEYAPNGTLFEHLHVKEVEHLDWNARMRIIMGIAYCLQYMHHDLNPPVTHPNLQSNAVYLTDDYAAKIAEISFCTGVAAKSKISGEDERKHFELRPFAGHETNVYSFGILLLEIISGKLPYSEEKGSLVNWAVDYLSDNRSISYLIDPTLKSFKDNELDIICEVIQECIHQDPRERPTMREITTKLREVIAISPDGASPKLSPLWWAELEILSVEAS* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01169 732 MobiDBLite consensus disorder prediction 336 358 - -
Eupl06g01169 732 FunFam Inactive receptor-like serine/threonine-protein kinase 411 518 - -
Eupl06g01169 732 MobiDBLite consensus disorder prediction 306 366 - -
Eupl06g01169 732 Gene3D Transferase(Phosphotransferase) domain 1 519 709 - -
Eupl06g01169 732 Gene3D Ribonuclease Inhibitor 40 220 IPR032675 -
Eupl06g01169 732 Pfam Protein tyrosine and serine/threonine kinase 450 701 IPR001245 GO:0004672|GO:0006468
Eupl06g01169 732 SUPERFAMILY Protein kinase-like (PK-like) 424 700 IPR011009 -
Eupl06g01169 732 Gene3D Phosphorylase Kinase; domain 1 404 518 - -
Eupl06g01169 732 PANTHER PROTEIN MALE DISCOVERER 2 22 730 - -
Eupl06g01169 732 SUPERFAMILY L domain-like 50 203 - -
Eupl06g01169 732 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 40 192 - -
Eupl06g01169 732 Pfam Leucine rich repeat N-terminal domain 44 80 IPR013210 -
Eupl06g01169 732 MobiDBLite consensus disorder prediction 317 335 - -
Eupl06g01169 732 ProSiteProfiles Protein kinase domain profile. 402 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01169 Eupl-Chr6 19431875 19439787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01169 80 704 Receptor kinase-like Gene Family AT1G28440 26.929 4.94e-47 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Eupl06g01169 PK_Tyr_Ser-Thr 8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01169 - - nnu:104611566 976.852