Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01167 ATGGCAGGAATTGGACCATTGACGCAGGACTGGGAACCCGTTGTGATCCGCAAAAAGGCTCCCACCGCCGCTGCTAAGAAAGACGAGAAAGCCGTTAACGCCGCCCGTCGCGTGGGCGCTGATATTGAAACGCTTAAGAAGTCTAATGCGGGGACAAACAAAGCTGCCTCTAGCAGCACTTCTTTGAACACAAGGAAGCTTGATGAAGACACGGAGAATCTTACCCATGACCGGGTGCCTACTGAACTGAAGAAAAACATCATGCAAGCTCGTATGGATAAGAAATTCACCCAGTCTCAGCTTGCACAACTGATCAATGAGAAGCCCCAAATAATCCAAGAGTATGAATCTGGGAAGGCTATTCCAAATCAACAGATAATTACCAAACTGGAGAGGGTTCTAGGTGTGAAACTGCGAGGAAAGAAATAA 429 0.4755 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKAVNAARRVGADIETLKKSNAGTNKAASSSTSLNTRKLDEDTENLTHDRVPTELKKNIMQARMDKKFTQSQLAQLINEKPQIIQEYESGKAIPNQQIITKLERVLGVKLRGKK* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01167 142 MobiDBLite consensus disorder prediction 42 81 - -
Eupl06g01167 142 MobiDBLite consensus disorder prediction 65 81 - -
Eupl06g01167 142 FunFam Multiprotein bridging factor 1 71 142 - -
Eupl06g01167 142 SUPERFAMILY lambda repressor-like DNA-binding domains 80 138 IPR010982 GO:0003677
Eupl06g01167 142 SMART mbf_short4 86 141 IPR001387 -
Eupl06g01167 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 3 142 - -
Eupl06g01167 142 Gene3D - 71 142 IPR010982 GO:0003677
Eupl06g01167 142 Coils Coil 87 107 - -
Eupl06g01167 142 MobiDBLite consensus disorder prediction 46 64 - -
Eupl06g01167 142 Pfam Helix-turn-helix 87 138 IPR001387 -
Eupl06g01167 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Eupl06g01167 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Eupl06g01167 142 CDD HTH_XRE 85 138 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01167 Eupl-Chr6 19385903 19397970 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Eupl06g01167 MBF1 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01167 K03627 - msin:131240984 262.307