Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01165 ATGGTTGAAAGACAAGAGATCTCTGATGGAGGAAACAGCACTGGGAGCGAGAACCAAGCCCAAAACACATCTCCAGTGTCTTCCCAAAAGTGGTTGTCCATTGACTTGAATGAAGACGCCACGAGTGAAGAGGATGAGAGTACTACTGAGGTAGCCGATGACAACGTTGAGGAAGATGAGGCAGTGACAAGAGGAAATTCAAGTAACAACAACACCACTGTGGAAGAGTGTGAACAATCGACTGCAGTTAGGCAATACGTTCGATCGAAAATGCCCAGGCTTCGTTGGACTCCTAATCTCCATCTTTCTTTTGTGCACGCTGTTGAAAGGCTTGGTGGGCAAGAAAGAGCAACTCCCAAATTAGTTCTCCAGCTAATGAATGTGAGAGGACTTAGCATTGCTCATGTTAAAAGCCACTTGCAGATGTATCGAAGTAAGAAGCTTGATGAGGCTGGGCAAGTTTTATCTCAAACAAATAGATCAATACAAGGAAGCCCTGAAATGTTCTATCAAAGAACTGATCCTCATCGACACTTCAGAATAGACAGCAGGGGCCTTTCTCTAGGCAAGAACATTAACGAGCCTAATCATCTTCTGAGTCTTTTACAGTATCCCCTCTCCCAACAATCATTTGATTACAAAGCTAGTTCTTCAAGATACCAAGACTGGGCTTTCAATCTGCATACTATGATAAGGCCAATCTCACAACCCGGCAAAGATCCTGGACTAGCCGGACTAGCCAAGGGTTTGATTCATGACATGATTTTCCAAAATGCCGAGAAGCAATCGACTTCGCACCTATTTGATATAAGTAATGCGATCATGGGAAATAGGCCTATTAGACCGAGCCAATTTCTTGAAGAAAAGAAGTGGCCACCACGTGAAATGATCAGCAATCAAGGTAAGGATAGGAAAGTCCCTATGAATATCACTTGGTCTGGTGATAGCTCCCAACCTCTAGCCCCCAAAATTTGTGCCACACCAATGTCGATTGAATCGGTCTTCACGGAGCAACCTTCATGGTGGAACCTCAGCAACAATACAAAAAAGAAACGATTTCAATCCAACTTCAGTGATCCCATAATTGTCTCTGATAATTTTGAACCTGTGTTCGAGCCACCATTTCGGCTTCAGTTACAAAGGCTGCCAACAAAACAACCCAAGCCAATGCCAGAAGAGATGCTGGAAATAGAAGAGAATGTAAGTGTGGAGAAGAAGATGAGGAAAGAGAAGGAATGGTTGCCTAATTTGCAGCTGAGTTTGAATCACGACTATGGAAATGGTGACGAGAACAAGGCTCGTGAAAGCACGAAAGAAATTAACACCATGCTTTCTCTTTCTTTGTTCCCCTCTTCATCAAGGCAACAACAAGTACAGCTTAATGAACAGCACAAAGACATTGTGCACGAGAAAACTTGGTGTTTACACACAAATTGCAGCAAGGCCACACTGAGGCTGAGTACTTAA 1467 0.4349 MVERQEISDGGNSTGSENQAQNTSPVSSQKWLSIDLNEDATSEEDESTTEVADDNVEEDEAVTRGNSSNNNTTVEECEQSTAVRQYVRSKMPRLRWTPNLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLSQTNRSIQGSPEMFYQRTDPHRHFRIDSRGLSLGKNINEPNHLLSLLQYPLSQQSFDYKASSSRYQDWAFNLHTMIRPISQPGKDPGLAGLAKGLIHDMIFQNAEKQSTSHLFDISNAIMGNRPIRPSQFLEEKKWPPREMISNQGKDRKVPMNITWSGDSSQPLAPKICATPMSIESVFTEQPSWWNLSNNTKKKRFQSNFSDPIIVSDNFEPVFEPPFRLQLQRLPTKQPKPMPEEMLEIEENVSVEKKMRKEKEWLPNLQLSLNHDYGNGDENKARESTKEINTMLSLSLFPSSSRQQQVQLNEQHKDIVHEKTWCLHTNCSKATLRLST* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01165 488 MobiDBLite consensus disorder prediction 62 80 - -
Eupl06g01165 488 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 148 IPR017930 -
Eupl06g01165 488 FunFam Myb family transcription factor 90 148 - -
Eupl06g01165 488 MobiDBLite consensus disorder prediction 1 80 - -
Eupl06g01165 488 Gene3D - 91 148 - -
Eupl06g01165 488 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 69 182 IPR046955 GO:0003700
Eupl06g01165 488 NCBIfam myb-like DNA-binding domain, SHAQKYF class 92 147 IPR006447 GO:0003677
Eupl06g01165 488 SUPERFAMILY Homeodomain-like 90 146 IPR009057 -
Eupl06g01165 488 MobiDBLite consensus disorder prediction 38 57 - -
Eupl06g01165 488 MobiDBLite consensus disorder prediction 7 36 - -
Eupl06g01165 488 Pfam Myb-like DNA-binding domain 94 144 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01165 Eupl-Chr6 19327739 19330882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01165 83 180 G2-like Transcription Factor Family AT2G42660 60.194 6.02e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl06g01165 Myb_DNA-binding 7.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01165 - - tss:122651014 464.151