Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01154 ATGCGGCTCAAGCGCCTCTCAACAGCCGGCGCATCGCCGCTACGTTACATCCCCCACCGACTCAATTCTCTCTTTAGAAGACCAAACAAACAACAGCAACAATACCAACGAAGAAACCGAGCAACACCCGATACAGAGACGACAACGATGGACGGAACGGAAACCACAACGGCGACGGCGTCGGGACGTCTGTCACATACGCCGTTAGTCTACCGTGAGGATTGCTGGAGGGAAGACGCCACCTACACCCTCATCGACGCCTGGGGAGACCGTTACCTTGAGCTCAACCGTGGCAACCTCCGTCAGAAGCACTGGCAAGAGGTTGCAGACGCCGTTAATGCCCGTCATGGCGCAGTTAAGAAGGCTCGTCGAACTGATGTTCAGTGTAAGAACCGGATCGATACCTTGAAGAAGAAATATAAGTTGGAGAAAGCTAGGATTTTGGCTTCCGCAGGAACCCTAACCAGTAAATGGCCCTTTTATTCTCTTCTCGATGCCCTAATTGGATCCTCTGTGCCACCAACGAAACCATCCCCACCGCTCCCGCTTCCTGCGCCCTATCGGAAAACCCTGCCTTCGCTTCCGCACCCTTCGGCAGTGCCGGTTGGCGCTCGATCTGCGAAGAAGAAACGCCCTTCCCCGCCCGTTGCCGTTGATGATTCCTTCTTCCGGAGGAATTATTCTGCGGTTGCCGCTGCTGCGGCAGCGGATGCGGTGGATTCTAGATCGTCTAGGTCTAGTACGGAGAGCCGGGGTAGGGATGGGGAGGTGGATGGGTTTCGAGAAGTGGCACAGGCAATCGTGAGATTTGCGGAGATTTATGAGAGGGTGGAGGGGGTGAAACAGCGGCGGATGATTGAATTGGAAAAGCAGAGAATGGAGTTTATGAAGAATTTGGAGTTTCAGAGAATGCAGATTTTTATGGATTCGCAGGTCCAGCTTGAGAAGATCAAGCGTTCAAAGAGAGCTGCTGCGGCTGACAGTTACTTATAG 993 0.5347 MRLKRLSTAGASPLRYIPHRLNSLFRRPNKQQQQYQRRNRATPDTETTTMDGTETTTATASGRLSHTPLVYREDCWREDATYTLIDAWGDRYLELNRGNLRQKHWQEVADAVNARHGAVKKARRTDVQCKNRIDTLKKKYKLEKARILASAGTLTSKWPFYSLLDALIGSSVPPTKPSPPLPLPAPYRKTLPSLPHPSAVPVGARSAKKKRPSPPVAVDDSFFRRNYSAVAAAAAADAVDSRSSRSSTESRGRDGEVDGFREVAQAIVRFAEIYERVEGVKQRRMIELEKQRMEFMKNLEFQRMQIFMDSQVQLEKIKRSKRAAAADSYL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01154 330 MobiDBLite consensus disorder prediction 173 216 - -
Eupl06g01154 330 MobiDBLite consensus disorder prediction 28 57 - -
Eupl06g01154 330 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 50 321 IPR044823 -
Eupl06g01154 330 Pfam Myb/SANT-like DNA-binding domain 73 167 IPR044822 -
Eupl06g01154 330 MobiDBLite consensus disorder prediction 238 257 - -
Eupl06g01154 330 Gene3D - 76 142 - -
Eupl06g01154 330 MobiDBLite consensus disorder prediction 173 191 - -
Eupl06g01154 330 FunFam trihelix transcription factor ASIL2 76 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01154 Eupl-Chr6 19027169 19048789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01154 222 319 Trihelix Transcription Factor Family AT3G14180 38.182 4.32e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl06g01154 Myb_DNA-bind_4 6.7e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01154 - - nnu:104611587 399.053