Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01144 ATGGCGTTTTCCAGGGCATTTCGCAGGGGAGATTCTGTTGAAATCAGCAGCAAAGAAGATGGGTTTCTTGGCTCTTACTTTGCTGCCACCATTATCGCCCCAGCTGGAAAAAATCAGTACTTGGTGGAATACAAGACACTCTTAACAGACGATGAGAGGAAGTTGCTGAAAGAGATCGTCGATGAGACCGAAGTAAGGCCGTCACCTCCTGAAATCGGAGTTTCTAGTTTCTCTCTTCTCGACAAAGTCGATGCCTACGACAATGATGGGTGGTGGGTCGGAAGGATCACCGGTAGAGATCTCTCAAAGTATTACGTGTATTTCGATAGCACCGGAGACAGGATTGGGTACCTATTCTCTCGGCTGAGGGTTCATCAGGAATGGGAGGATGGCAAGTGGGTTCCTTCCCAGAACCAGAGAAGGATGTGA 429 0.4848 MAFSRAFRRGDSVEISSKEDGFLGSYFAATIIAPAGKNQYLVEYKTLLTDDERKLLKEIVDETEVRPSPPEIGVSSFSLLDKVDAYDNDGWWVGRITGRDLSKYYVYFDSTGDRIGYLFSRLRVHQEWEDGKWVPSQNQRRM* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01144 142 CDD Tudor_Agenet_AtDUF_rpt1_3 7 70 - -
Eupl06g01144 142 Gene3D - 2 78 - -
Eupl06g01144 142 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 6 138 - -
Eupl06g01144 142 CDD Tudor_Agenet_AtDUF_rpt2_4 79 124 - -
Eupl06g01144 142 Pfam Agenet domain 10 70 IPR008395 -
Eupl06g01144 142 SMART agenet_At_2 75 130 IPR014002 -
Eupl06g01144 142 SMART agenet_At_2 5 73 IPR014002 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01144 17 131 PHD Transcription Factor Family AT5G58610 26.277 6.39e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01144 - - nnu:104613117 180.644