Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01130 ATGGGTTCGTTTTCTTGGAATTCTGGCGTTGTTTATGGAACTGAATTTCCGAGATTATTCGATGGGTTCCCACAGAATCCAGGGTTTCGGTCGATGGGTCGCGGTGGGTCGTCTTCATCGTCGTCGTTGGTTTTGGATAGTGAGAGGGGAGAGCTCGTCAAGGCGCCGGCGAGATTGGGTCAGAAGGGGGTCTCGGAAGCGAAGGCCATGGCCGCTTTGAAGAGCCACAGTGAGGCGGAGAGAAGGCGAAGACAGAAGATTAATGCTCATCTCAATACACTTCGGAGCCTTGTTCCCTGCACAGAAAAGATGGACAAAGCAGCATTGCTTGCGGAGGTGATCAGTCATGTGAAGGAACTGAAGAGGAGCGCAACGGAAACCAGTAAAGGTTTTGTCATCCCAATGGATGTTGATGAGGTGAGAGTTGAACCTCATGAGGATGGACTGGATGGAGGACCTTTTTCTTTCAGGGCATCTCTGTGCTGTGATGATCGACCTGAGATTCTGTCTGATGTAAGACAAGCGCTTGAGGCATTCAATCTGAAAACAGTGAAGGCAGAAATCTCAACCTTGGGAGGAAGGATGAAGAATGTATTTGTCATGACTGCCTGCAAAGAAGAGAATGTTGGAATTGCTGAGGTACGATGCCTCATGAGTTCTGTTCACCAGGCCCTGAGGTCTGTCTTGGATAAAATTTCTGCCTCACAGGAGTTCTCACCTAGAACTACATATCCGAACAAGAGACGAAGAATTTCACTTTTTGATTCTTTGAGCTCATCTTCATGA 786 0.4796 MGSFSWNSGVVYGTEFPRLFDGFPQNPGFRSMGRGGSSSSSSLVLDSERGELVKAPARLGQKGVSEAKAMAALKSHSEAERRRRQKINAHLNTLRSLVPCTEKMDKAALLAEVISHVKELKRSATETSKGFVIPMDVDEVRVEPHEDGLDGGPFSFRASLCCDDRPEILSDVRQALEAFNLKTVKAEISTLGGRMKNVFVMTACKEENVGIAEVRCLMSSVHQALRSVLDKISASQEFSPRTTYPNKRRRISLFDSLSSSS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01130 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 120 IPR011598 GO:0046983
Eupl06g01130 261 CDD bHLH_AtAIG1_like 66 144 - -
Eupl06g01130 261 Pfam Helix-loop-helix DNA-binding domain 75 120 IPR011598 GO:0046983
Eupl06g01130 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 126 IPR036638 GO:0046983
Eupl06g01130 261 Gene3D - 66 130 IPR036638 GO:0046983
Eupl06g01130 261 SMART finulus 77 126 IPR011598 GO:0046983
Eupl06g01130 261 PANTHER TRANSCRIPTION FACTOR BHLH30 33 254 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01130 Eupl-Chr6 18567448 18571121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01130 12 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 39.773 2.10e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl06g01130 HLH 3.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01130 - - nnu:104613105 326.635