Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01125 ATGTCAGATTCTTCTCCGTGGTTCTTCTCTTACTCCACAAAACTTCGCTTCTTCGCCCGAATCCGACGGTTTCTACAAACCAAGACTGTTAGCAAGTGTTACGGATCGTCTGATCGGTTCGATATGGCGAGAGATATTATTGAAGAAGAAAAGAAAGAAGATCAAAGAGAGATGGAAAATGAAATCGAGGAAAGTTTATTTGTGTTACAGAGATCTGTTAAGCAACTTCACTTTGGAAGCTGGAAAGAGAAGGAGATTGCAGCTGAAGAAATCAAGAGAATGGCCAAAGATGATCTGAAGACGAGGAAATCTCTTGCTGCGCTTGGTGTTATTCCCTCCCTTGTGTCGATGCTCGATTCGGAGGTTTCGAATCATCGGAGATTAGCGGTTCAGGCTTTGATTGAGCTCTCTAATGGCACTTACACCAACAAAGCTCTCATGGTGGAGGCCGGAATCCTTTCGAAATTACCAGATAACGTTGACTCAGTAGACAAGTCAAGCCGACATGATTTTGTAGTACTAATATTCTCTATCTCTTCCCTAGCTAACACCCAATTCCCCGTTGCTTCAACAGAAACTCTCCCGTTCCTTGTCAGTATCCTCGATTCAGACGCTAGCGTCGAAGCAAAGACTGCTTGTCTAGGTGCTCTATATAACTTATCCCCTGTGTTGGATAATGTAGGTCCTTTGGTTTCTAATGGTGTAGTACATACTCTCTTGAAGTTGTCATTGGAAAAAGAAGCTTCAAAGAAAGCTTTGGCAACTCTAGGGAACTTGGTGGTGACTGTAATGGGAAAGAAAGCTATTGAAAATGACCCCATGGTGCCAAAGAGCTTGATAGAGATTATGACATGGGATGATAAACCCAAATGCCAAGAACTAGCTGCTTACATTTTGATGATTTTGGCACATCAAAGCTCAGTGCAAAGACAGAAGATGGCACAATCAGGAATTGTTCCAGTTCTTCTTGAGGTAGCTTTGTTGGGGAGTCCTTTAGCTCAGAAAAGGGCATTGAAGTTATTGCAGTGGTTCAAAGATGAAAGGCAAACAAGGATAGGAGCACATTCTGGGCCACAAACAGGAAGAGTTGGAATTGATTTGCCTTTAAATCTAAGGGAGCAGACAAGGGAAGGAAAGAAAATCATTAAGAAGATGGTGAAGCAAAGTCTTGATAAGAATATGGAATTGATTACAAGGAGAGCAAATGCTGCTGGGGATTCCTCTAAGCTCAAGGCTTTGGTTGTTAGCTCAAGCTCTAAGAGCTTGCCTTATTGA 1275 0.4235 MSDSSPWFFSYSTKLRFFARIRRFLQTKTVSKCYGSSDRFDMARDIIEEEKKEDQREMENEIEESLFVLQRSVKQLHFGSWKEKEIAAEEIKRMAKDDLKTRKSLAALGVIPSLVSMLDSEVSNHRRLAVQALIELSNGTYTNKALMVEAGILSKLPDNVDSVDKSSRHDFVVLIFSISSLANTQFPVASTETLPFLVSILDSDASVEAKTACLGALYNLSPVLDNVGPLVSNGVVHTLLKLSLEKEASKKALATLGNLVVTVMGKKAIENDPMVPKSLIEIMTWDDKPKCQELAAYILMILAHQSSVQRQKMAQSGIVPVLLEVALLGSPLAQKRALKLLQWFKDERQTRIGAHSGPQTGRVGIDLPLNLREQTREGKKIIKKMVKQSLDKNMELITRRANAAGDSSKLKALVVSSSSKSLPY* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01125 424 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 109 151 IPR000225 GO:0005515
Eupl06g01125 424 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 424 - -
Eupl06g01125 424 Gene3D - 42 358 IPR011989 -
Eupl06g01125 424 SUPERFAMILY ARM repeat 73 344 IPR016024 -
Eupl06g01125 424 Coils Coil 44 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01125 Eupl-Chr6 18500659 18504082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01125 89 351 U-box Gene Family AT1G67530 29.889 1.09e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01125 - - ming:122068944 541.191