Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01097 ATGGGAGAGAGTCAGCACCACCATCACCACCAACCATCTTCTAGGCTGGGGTTGCTGAAGAGCAGCGGCGGAGGAGAGATCGTAGAGGTCCAAGGAGGCCACATTGTCCGATCAACCGGAAGGAAAGACCGACACAGCAAGGTCTGCACCGCAAAGGGTCCAAGGGACCGCAGGGTCCGCCTCTCTGCTCACACTGCTATCCAGTTCTATGACGTTCAGGACCGCCTCGGCTACGACCGACCCAGTAAGGCGGTCGATTGGCTCATCAAGAAGGCCAAGGCTGCTATCGACGAACTCGCCGAGCTCCCGGCCTGGCACCCAACTGCTACTACTACTACCGTCAATTCCTCGCAACCTGAACAAGGCCAAGAAGAGGAGAATCAGCAGAGTTTCCAGCGTCTTCGACAGCAACAGGCGGAGACAGACGCTGTTGTCGGTTCGAGTAAGAGATCAATGGCCGGTTCTGGGTATGGTTTTCAGCAGAATCTCAGCAGCAACACCAGCAACAGCTCCAGCTTCCTTCCTGCTTCTCTAGACTCCGACGCCATTGCCGACACCATTAAGTCCTTTTTCCCCATGACAGCTGCTACATCGTCGTCGTCTTCGATCCATTTTCAGAACTACCCTCCTGACCTGCTCTCCAGAACCACCAGCCAATCCCAAGATCTTCGCCTTTCACTTCAGTCCTTCCAAGACCCAATCCTCCTCCATCAGCAATCCCACCACCATTCAACTCCTACTCCTTCCGCTGAACAAGCCCTTTTCTCCAGCTCCGCTTCCCTGGCGTTCGATGCCACCTCCGGCAGCTGGACGGAGCAGCAGACGCCGGAGATGGGGCGGTTTCAAAGAATGGTCGCTTGGCACTCCGGTGCAGTACCAGGTAGTGGAGGAGGAGGAGGAGGATTTGTGTTCAATTCGCCACCACCACAGCCGCTGCAACCTTTGCTCGGCCAAAATCCATCATTTTCACAGAGGGGACCCCTTCAGTCCAGTAACTCACCTTCGGTTCGTGCTTGGACGGACCAGATGATTTCCGCCACCGATCATCAGCAGACGCCTGCAGTCCATCAGTCATCGATCTCTGGAATTGGATTTGCCTCCGGCGGATTCTCTGGGTTTCGCATTCCAGCACGAATACAGGGTGAAGAGGAGCACGACGCCGTTTCCAACAAGCCGTCCTCTGCTTCTCGCCATTGA 1197 0.5581 MGESQHHHHHQPSSRLGLLKSSGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWHPTATTTTVNSSQPEQGQEEENQQSFQRLRQQQAETDAVVGSSKRSMAGSGYGFQQNLSSNTSNSSSFLPASLDSDAIADTIKSFFPMTAATSSSSSIHFQNYPPDLLSRTTSQSQDLRLSLQSFQDPILLHQQSHHHSTPTPSAEQALFSSSASLAFDATSGSWTEQQTPEMGRFQRMVAWHSGAVPGSGGGGGGFVFNSPPPQPLQPLLGQNPSFSQRGPLQSSNSPSVRAWTDQMISATDHQQTPAVHQSSISGIGFASGGFSGFRIPARIQGEEEHDAVSNKPSSASRH* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01097 398 MobiDBLite consensus disorder prediction 1 21 - -
Eupl06g01097 398 MobiDBLite consensus disorder prediction 376 398 - -
Eupl06g01097 398 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 330 IPR005333 GO:0003700
Eupl06g01097 398 MobiDBLite consensus disorder prediction 107 158 - -
Eupl06g01097 398 MobiDBLite consensus disorder prediction 296 336 - -
Eupl06g01097 398 MobiDBLite consensus disorder prediction 33 56 - -
Eupl06g01097 398 MobiDBLite consensus disorder prediction 378 392 - -
Eupl06g01097 398 Pfam TCP family transcription factor 40 142 IPR017887 -
Eupl06g01097 398 MobiDBLite consensus disorder prediction 316 336 - -
Eupl06g01097 398 ProSiteProfiles TCP domain profile. 41 99 IPR017887 -
Eupl06g01097 398 MobiDBLite consensus disorder prediction 107 145 - -
Eupl06g01097 398 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01097 Eupl-Chr6 17972269 17975576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01097 1 396 TCP Transcription Factor Family AT3G15030 54.567 4.75e-115 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl06g01097 TCP 5.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01097 - - nnu:104612105 499.975