Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01084 ATGTCTTTTCCAATCTCTACCGCTTCTACTACATTTTCTCTGCGCAAATTCATCTTCTTCTTCCTAATTCTTCTCTATCATGGAGCGACCGCAGTGGCGGATGACGATAACGATAACAAAGTGGCGAATATCGGGGCGATCATCGATGGTAATTCCCGTATTGGAAAAGAACAGAAGACAGCCATGGAAATCGCAATCGAAGATTTTAACAACTCGTCAAACGGCAACTACAAATTAGTACTCCATGTACGCGACTTGGGTCCGCATCCCCTCCAAGCTGCTTCCATAGTGGATGATCTGATCAAAGAGCAGGGAGCACAAGTGATTATTGGCATGGAGACATGGCAGGAGGCGGCATTAGTCGCCGAAATCGGAAATCGAGCACAAGTTCCTGTTCTTTCTCTTGTGACAGCTTCCATCACCCCACCATTAACATCGGTGCGATGGCCTTTCTTGGCTCGGATGGCTAGCAATGAGTCCATACAGATGAGATGTGTGGCCGCCATTGTGGGCTCTTACCAGTGGCGTAGAGTCATAGTAATCTATGAAGATGACACTTATGGTGGTGATTCGGGGATCATTACACTTCTCTCTGATGCTCTCAAAGATGTAGGCTCAGCAATTGAGAAATGCTCAGCTTTCCCACCCTTATCTTCTCTCTCTAATCCGAAATCCACCATTCGAGAAGAACTAGAAAAGCTAAAGAATAACCAGCAGTCCAGGGTCTTCATCGTCCTTCAATCATCGTTACAATTAGCCACCCATTTGTTCACAGAAGCAAAGCAAATGGGAATGATGGGAAAAGACTCCGTCTGGATCACTACGGATTCTATAACAAGCCTCCTCGATGCCGTTAACTCCTCCGTTATCTCCTCCATGGAAGGTATTGTAGGAATCAAGACTTACTTCTCCGATGCCACCGCACCATATGGAGACTTCCGTGTCAAATTCCGGAAAACCCTTCGATCAAAATATCCAGATGAAGATAAATTCGAGCCAGGAATTTACGCGCTCCGGTCATATGATACCATTTCTACAATTGCCCGAGCCATGGAGAGATTAACCAACAACAGTACCTCGAAAATGTTGTTAGAAAATATCTTATCGAGCAATTTCAGTGGTTTAAGTGGTGAAATTCGATTCGAAGAAGGGGAATTATTGCACTCAACGGCTTATCAGATCGTTAATGTGGTTGGAAAGAGTTACAAAGAGCTGGGATTCTGGTCGACGGAGTGTGGATTCTCCAAGAGTGTTATAAGCAAAGAAGATGGAGAGAACTGTACAAATGGTGATAGTGGGACCATGCAAGAGTTGGGTGGTCCGTTGTATTGGCCAGGGGGGCTTCTAAACCGGGACCCAAGAGGATGGGTCATGCCCACTGATGCAGAACGGCTGAAGATCGGTATTCCGGGCAAAGCCTTGTTCGAGAAGTTCGTGAAGGTGGAAGAGGGCAAGAATCCCACGGGTTTTTGCATTGATGTGTTCGAAGAGGCCGTGAAACGTCTAGAATATTATCTTCCATACGAATTTATGCCCTTCGATGGCTCCTACGATGAACTAGTGGAGCAGGTCTATCTCAAGAAATTCGATGCTGTGGTGGGTGATGTGACAATCCTAGCCAATCGATCGAAATACGTGGAATTCACTCAGCCATACGCAGAGTCGGGGTTGTCGATGATTGTTCCGGTGAAACAAGAAGAATCTCAGAAGGTATGGATGTTCATGAAGCCCTTCACCAAGGCGATGTGGCTAGGGACTGGTGCAATCTTTATGTATACAATGTTCATCGTCTGGTTCTTGGAACACAGATCCAATCCGGACTTTAGAGGCCCATGGAAGAATCAACTCGGCACCGCGATGTGGTTCACCTTCTCTACTCTCTTCTTTGCACATAGGGAGAGAATTCATAGCAACTTCACTCGAGTGGTGATCGTGGTGTGGCTGTTCGTGGTCTTGATCCTGAACTCCAGCTACACCGCCAGTCTCACTTCCATGCTCACGGTCGACCGACTTGAACCAACCGTGATAGATATTGAGTCATTAAAGAGGAACAACTCAACAGTTGGGTGCGATGGTGACTCGTTTGTCCGTAAATACTTAGAAAATGTTATTGGTTTCCACCCGGACAGTATCGTGACTGTCGCGAGTGAAGACGACTATCCAAAGGAATTCAGAAGCGGAAAAATCAAGGCCGCCTTTCTGGAGCTACCCTATGAAAGAGTGTTCTTCTCCAGACACTGTAAGGGATACAAGGCAACCGGACAGACCTACAGATTTGGAGGCTTTGGCTTTGTCTTTCCAAAAGGCTCTCCTATAGCCACCGACTTATCCAAAGCGATTCTAAAACTATCAGAAAATGGGAATATAACCAGATTGGAGTATAAATGGTTCTCCTCCAAATGTTCAAATTCCACAACTACTATGAACAACAAAAGCTTGAGCCTCCATAGCTTTTGGGGTCTTTTCATCCTCACTGGGGGTACTTCTACCCTTGTCTTTCTACTATATCTCCTTCACCTACTCCGACGCTACCAAGAAGCAGACGGAGGCAATGCAGCTCCGGAAAAAGCTTCGACTTCAATTGGGGAGTATGTGAGTGGGTACAACAGCCTAGGACACCCTCAGACGTCTGCACCAGCTGAAATCGAAATGCCGAAAACATATACGGCGCCCAGTTGGGATACTCGGCCCCGTCTGCCATTTCTGGGTTTTGCGTCTTTTCCTGGTTTGGGTAGGCGCATCCATGCTCTTAACTTGGACGACGCTGAACGGGAACATCTCCCATCTAGCACTTAA 2796 0.4657 MSFPISTASTTFSLRKFIFFFLILLYHGATAVADDDNDNKVANIGAIIDGNSRIGKEQKTAMEIAIEDFNNSSNGNYKLVLHVRDLGPHPLQAASIVDDLIKEQGAQVIIGMETWQEAALVAEIGNRAQVPVLSLVTASITPPLTSVRWPFLARMASNESIQMRCVAAIVGSYQWRRVIVIYEDDTYGGDSGIITLLSDALKDVGSAIEKCSAFPPLSSLSNPKSTIREELEKLKNNQQSRVFIVLQSSLQLATHLFTEAKQMGMMGKDSVWITTDSITSLLDAVNSSVISSMEGIVGIKTYFSDATAPYGDFRVKFRKTLRSKYPDEDKFEPGIYALRSYDTISTIARAMERLTNNSTSKMLLENILSSNFSGLSGEIRFEEGELLHSTAYQIVNVVGKSYKELGFWSTECGFSKSVISKEDGENCTNGDSGTMQELGGPLYWPGGLLNRDPRGWVMPTDAERLKIGIPGKALFEKFVKVEEGKNPTGFCIDVFEEAVKRLEYYLPYEFMPFDGSYDELVEQVYLKKFDAVVGDVTILANRSKYVEFTQPYAESGLSMIVPVKQEESQKVWMFMKPFTKAMWLGTGAIFMYTMFIVWFLEHRSNPDFRGPWKNQLGTAMWFTFSTLFFAHRERIHSNFTRVVIVVWLFVVLILNSSYTASLTSMLTVDRLEPTVIDIESLKRNNSTVGCDGDSFVRKYLENVIGFHPDSIVTVASEDDYPKEFRSGKIKAAFLELPYERVFFSRHCKGYKATGQTYRFGGFGFVFPKGSPIATDLSKAILKLSENGNITRLEYKWFSSKCSNSTTTMNNKSLSLHSFWGLFILTGGTSTLVFLLYLLHLLRRYQEADGGNAAPEKASTSIGEYVSGYNSLGHPQTSAPAEIEMPKTYTAPSWDTRPRLPFLGFASFPGLGRRIHALNLDDAEREHLPSST* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01084 931 Gene3D - 164 329 - -
Eupl06g01084 931 Pfam Ligand-gated ion channel 799 827 IPR001320 GO:0015276|GO:0016020
Eupl06g01084 931 CDD GluR_Plant 464 797 - -
Eupl06g01084 931 Pfam Bacterial extracellular solute-binding proteins, family 3 478 798 IPR001638 -
Eupl06g01084 931 Gene3D - 725 806 - -
Eupl06g01084 931 FunFam Glutamate receptor 571 709 - -
Eupl06g01084 931 FunFam Glutamate receptor 464 571 - -
Eupl06g01084 931 Pfam Receptor family ligand binding region 59 398 IPR001828 -
Eupl06g01084 931 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 855 IPR015683 -
Eupl06g01084 931 PIRSF IGluLR_plant 12 887 IPR017103 -
Eupl06g01084 931 FunFam Glutamate receptor 162 331 - -
Eupl06g01084 931 Gene3D - 338 464 - -
Eupl06g01084 931 Gene3D - 39 163 - -
Eupl06g01084 931 SUPERFAMILY Periplasmic binding protein-like II 453 799 - -
Eupl06g01084 931 SUPERFAMILY Periplasmic binding protein-like I 43 456 IPR028082 -
Eupl06g01084 931 Gene3D - 571 702 - -
Eupl06g01084 931 Gene3D - 465 570 - -
Eupl06g01084 931 SMART GluR_14 466 799 IPR001320 GO:0015276|GO:0016020
Eupl06g01084 931 CDD PBP1_GABAb_receptor_plant 43 417 IPR044440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01084 Eupl-Chr6 17742627 17756324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01084 17 846 Ion Channels AT2G29120 34.902 2.24e-167 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01084 - - nnu:104613179 1068.14