Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01081 ATGGCTCTCTCTATCTCTACAGCTGCTTCTTCATCTTCTCGACCCAATTTCTTCTTCATCTTCATTATTCTTCTTCTCTCCCATGGATCAATCGCTGCAGCTGATGTTGATAACAAGCGCAAAGAGGTGAACATCGGGGCTATTGTTGATGCCAATTCCCGTATCGGAAAAGAACAGAAGGCAGCCATGGAGATTGCAATTCGAGACTTCAACAACGCCTCGAACAATAACGCCTACAATTTAGTCCTCCATGTACGCGATTCCAGCAGTGATCCCCTCCGAGCAGCCAACGCTGCGGATGATCTCATTAAAGATCTGGAAACACAAGCAATTGTTGGAATTGGAACATGGCAGGAAGCCGCGTTAGTTGCCGATGTAGGAAACCAAGCACAAGTGCCTGTCCTTTCCATGGCAACAGCTGCAGTTATTCCTCCATTAACATATGTGCACAATCCTTTCTTTGTCCGGATGGCTAACAATGATTCTCTACAGATGAGATGTGTAGCCGCTATAGTTGGCTCCTACAAGTGGGGGAAGGTCATTACAATATACGAAGATGGAGCCTATGGCGGCGATTCAGGGATGAACGCCCTTCTCTCCGACGCTCTCAGAGATGAAGGCTCAGAAATTGAGTACCAATTGGCTCTCCCACCCTTTTCATCTCTGTCTAATCCAAAATCCATAATTAAAGAAGAATTAGAGAAGCTAAAGAGCAAGCAGTGCAGGGTTTTTATCGTCCTCCATTCGTCGTTACCGTTGGCCACTCATCTGTTCATAGAAGCGAAGCAAATGGGAATTATGGGGAAAGGTTCTGTCTGGATAACCACAGATACTGTTACAAGCCTCCTTGATTCTGTTAACTCCTCAACCAGTTACTCCATGCAAGGCGTCCTAGGAATCAAGCCCTACTTCTCAGAAACCAGCGCATCTTTTAGAGATTTTTACTTTAAATTCCGACAAATTTTCAAACTGGAATATGCAGAAGAAGATAAGGCCGAGCCGGGAATTTATGCACTTCGAGCATTCGATACCATTTCTACTGTAGCACAAGCAATTGAAAGATTAACCAACAATAGTACATCAAAAACATTGTTGGAGAATATCTTATCGAGCGATTTCAATGGTTTAAGCGGTAAAATTCAATTCAAAGACGGTGAATTGTCGCATTCACCAACTTATCGGATCATTAATGTGATTGGAAATGGCTACAAAGATATCGGATTCTGGTCTCCCAAATTTGGTTTCTCAGATGAAGAAGCAGGTGGTAACGGTATTATTGGGACCATGAATGAATTAGATAGTTCAGTTGATTGGCCCGGGGGCTTACGACGAGTCCCCCGAGGATGGACAAAACTCAGTGATGCTATCCCGATAAAGATCGGTGTTCCAGGCAACGCCAAGTTCAAGAAGTTCGTAAAGGTGGAACATACAGAAGTTCTCAAAGGTGTAAATCAATCGTCTGTTTCTGGTTTCTGTATTAGTGTGTTTGATGAGGCGGTGAAACTCTTAAATTACGATTTACAGTATGAGTTCGAGCCCTACTCCGAGGGCAATTATGATGAACTAGTGAACAAGGTCTATAAGAAGGAATTCGATGCCGTGGTGGGTGATGTGACGATCCTAGCCAACCGATCCAAGTATGTGGAATTCACTGTGCCTTACGCGAAATCGGGGCTATCGATGGTGGTCCCTGTTAAAAATTCTAAGACAGCATGGATGTTCATGAAGCCCTTCACCCCAACAATGTGGCTTGCAACAGGCACCATTTTTGTCTACACAATGTTCATCGTCTGGTTCTTGGAACATGGATCCAATCCGAACTTCAGAGGCCCATGGATGAGTCAACTCGGCAACACATTGTGGTTTTCCTTCTCCACTCTCTTCTTTGCACACAGGGAGACACTTTATAGAAATTACACTCGCATTGTGGTCCTGGTGTGGCTCTTCGCGGTGCTGGTCCTCACATCCAGCTACACTGCCAGTCTCACCTCCATACTCACGGTTCCTCCACTCGAACCCACCGTGCCAAGTATAGACTCACTGAGGAACAACAACTTAAAATTTGGATGCCATATTGACTCATCATTCGTCAAGACTTACTTAGAGTCTGTGAGTGGTCTTGACTTGAAGAACATCATCGATATCAAGAGTGAAGAAAACTATCTGGAGGAATTCAGAAAAGGAACTATCGCGGCCGCATTCTTGGAGATCCCTTATGAAAGAGTCTTCCTCTCCAAATACTGCAAGGAATACACCGTCGCCGAACGTCCCATTAGATTTGGAGGATTCGGCTTTGTCTTTCCAAAGGGTTCTCCTCTAGCCACCGACATCTCGGAAGCCATTCTAATACTATCAGAAAATGGAATGCTAACCCAATTGGAAGATAATTGGTTCCCTCTGTCCTATGAATGTTCAAATTCTGGAACTGACACAGAAGACAAAAGCTTGAGCCTCAGCCTGAATAGCTTTTGGGGGATCTACATCATCACTGGTGGCACTTCTACCATTGTCTTTCTACTCTTCCTAGTTCACCTACTATGGGAATCTCGACGCCACCACGAAGATTATGAAGGAAAAAAATCTCCAATGGACAGACTCAGGAAGTACTTTCATGATGGCCAGCTTCATTTTCCAGAGCAAGCTCTGACTTCCGAACAAGCAGTAGACGTCGATGTTGCAAGTTCTTCAGGTGAGGGGTTTGTGTATGTGAGTGGGTACAACTCTCCAAGTCCAGGGCACGTTCAGGCATCACTACAAGCTGAAATTGAAATGCCAGAAAGGTCTACACCCTATTTGGATGCTCGGACACATGCGTCATTCCGAGTTTAG 2829 0.4475 MALSISTAASSSSRPNFFFIFIILLLSHGSIAAADVDNKRKEVNIGAIVDANSRIGKEQKAAMEIAIRDFNNASNNNAYNLVLHVRDSSSDPLRAANAADDLIKDLETQAIVGIGTWQEAALVADVGNQAQVPVLSMATAAVIPPLTYVHNPFFVRMANNDSLQMRCVAAIVGSYKWGKVITIYEDGAYGGDSGMNALLSDALRDEGSEIEYQLALPPFSSLSNPKSIIKEELEKLKSKQCRVFIVLHSSLPLATHLFIEAKQMGIMGKGSVWITTDTVTSLLDSVNSSTSYSMQGVLGIKPYFSETSASFRDFYFKFRQIFKLEYAEEDKAEPGIYALRAFDTISTVAQAIERLTNNSTSKTLLENILSSDFNGLSGKIQFKDGELSHSPTYRIINVIGNGYKDIGFWSPKFGFSDEEAGGNGIIGTMNELDSSVDWPGGLRRVPRGWTKLSDAIPIKIGVPGNAKFKKFVKVEHTEVLKGVNQSSVSGFCISVFDEAVKLLNYDLQYEFEPYSEGNYDELVNKVYKKEFDAVVGDVTILANRSKYVEFTVPYAKSGLSMVVPVKNSKTAWMFMKPFTPTMWLATGTIFVYTMFIVWFLEHGSNPNFRGPWMSQLGNTLWFSFSTLFFAHRETLYRNYTRIVVLVWLFAVLVLTSSYTASLTSILTVPPLEPTVPSIDSLRNNNLKFGCHIDSSFVKTYLESVSGLDLKNIIDIKSEENYLEEFRKGTIAAAFLEIPYERVFLSKYCKEYTVAERPIRFGGFGFVFPKGSPLATDISEAILILSENGMLTQLEDNWFPLSYECSNSGTDTEDKSLSLSLNSFWGIYIITGGTSTIVFLLFLVHLLWESRRHHEDYEGKKSPMDRLRKYFHDGQLHFPEQALTSEQAVDVDVASSSGEGFVYVSGYNSPSPGHVQASLQAEIEMPERSTPYLDARTHASFRV* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01081 942 Gene3D - 571 708 - -
Eupl06g01081 942 Gene3D - 452 570 - -
Eupl06g01081 942 Gene3D - 343 451 - -
Eupl06g01081 942 SMART GluR_14 459 800 IPR001320 GO:0015276|GO:0016020
Eupl06g01081 942 Pfam Bacterial extracellular solute-binding proteins, family 3 486 798 IPR001638 -
Eupl06g01081 942 CDD GluR_Plant 457 798 - -
Eupl06g01081 942 FunFam Glutamate receptor 164 332 - -
Eupl06g01081 942 FunFam Glutamate receptor 457 572 - -
Eupl06g01081 942 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 863 IPR015683 -
Eupl06g01081 942 CDD PBP1_GABAb_receptor_plant 44 417 IPR044440 -
Eupl06g01081 942 Gene3D - 726 806 - -
Eupl06g01081 942 FunFam Glutamate receptor 571 702 - -
Eupl06g01081 942 Gene3D - 162 331 - -
Eupl06g01081 942 PIRSF IGluLR_plant 13 900 IPR017103 -
Eupl06g01081 942 Pfam Receptor family ligand binding region 60 400 IPR001828 -
Eupl06g01081 942 SUPERFAMILY Periplasmic binding protein-like II 438 799 - -
Eupl06g01081 942 Pfam Ligand-gated ion channel 799 832 IPR001320 GO:0015276|GO:0016020
Eupl06g01081 942 SUPERFAMILY Periplasmic binding protein-like I 40 449 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01081 Eupl-Chr6 17697073 17703300 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01081 17 851 Ion Channels AT2G29120 35.540 4.30e-169 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01081 - - nnu:104613179 957.977