Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01080 ATGGCACAGTTACCTCCCAAAGTCCCAAACATGGTACCAAATTGGTCTAATTTCCCTCACCAAAGGATATCCTCCATGGGGAATTTGACACCCACAAACACAACCCAACAACCTTCTTGGGTCGACGAATTCCTCGACTTCTCGTCGGTGAAGCGTGGCACGCATCGGAGATCAGCGAGCGACTCAATTGCCTTCCTTGAAGCTCCATTGGTTGAAGAATGCCGAAACTCCTCGGCCATGGTCACATTGAGGCCTGGAGACACTGAATTTGATCGGTTGGACGATGAGCAACTCATGTCTATGTTCTCGGACGACATTTCCGTTACCATACCCCAAACTGTTTCGTCGTCTAACCCCTCGACTCCATCGGATCACAATAGTATTAATGATGAAAAACCGACACCATCGGATCAGCAGCTAAGGAATGAATCAGGGGAAGTACAGAGCTCATGCAAGTCGGACCCACAATTCCCTCCACCTTCTAACAGTAATGGTGATTCTTTCATCGACCCCAAAAGGGTCAAGAGGATTTTGGCGAACAGACAGTCCGCGCAGAGATCACGAGTGAGGAAGCTACAATACATCTCCGAGCTCGAACGAAGCGTAACCTCGTTGCAGACGGAAGTATCGGCTTTGTCGCCGCGGGTTGCATTTCTGGACCATCAACGTCTGGTTCTTAACGTCGACAATAGCGCTCTTAAGCAAAGAATCGCCGCTCTCGCTCAAGATAAGCTTTTCAAAGATGCTCACCAAGAAGCATTGAAGAAGGAGATAGAGAGATTAAGGCAAGTTTATCACCAACAGAATCTGAAGAAGATGGGCACTACACCCACTGATACCCACGGTTGTACAGACAAAGAGCAGCTTCTCAACTGA 876 0.484 MAQLPPKVPNMVPNWSNFPHQRISSMGNLTPTNTTQQPSWVDEFLDFSSVKRGTHRRSASDSIAFLEAPLVEECRNSSAMVTLRPGDTEFDRLDDEQLMSMFSDDISVTIPQTVSSSNPSTPSDHNSINDEKPTPSDQQLRNESGEVQSSCKSDPQFPPPSNSNGDSFIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRLVLNVDNSALKQRIAALAQDKLFKDAHQEALKKEIERLRQVYHQQNLKKMGTTPTDTHGCTDKEQLLN* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01080 291 MobiDBLite consensus disorder prediction 270 291 - -
Eupl06g01080 291 MobiDBLite consensus disorder prediction 110 171 - -
Eupl06g01080 291 Pfam bZIP transcription factor 172 217 IPR004827 GO:0003700|GO:0006355
Eupl06g01080 291 Coils Coil 251 271 - -
Eupl06g01080 291 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 170 233 IPR004827 GO:0003700|GO:0006355
Eupl06g01080 291 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 175 190 IPR004827 GO:0003700|GO:0006355
Eupl06g01080 291 MobiDBLite consensus disorder prediction 110 168 - -
Eupl06g01080 291 FunFam Basic leucine zipper 61 171 244 - -
Eupl06g01080 291 PANTHER BASIC LEUCINE ZIPPER 34 1 278 - -
Eupl06g01080 291 CDD bZIP_plant_RF2 173 223 IPR044759 GO:0003700|GO:0006355
Eupl06g01080 291 SMART brlzneu 168 232 IPR004827 GO:0003700|GO:0006355
Eupl06g01080 291 SUPERFAMILY Leucine zipper domain 172 226 IPR046347 GO:0003700|GO:0006355
Eupl06g01080 291 Gene3D - 171 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01080 Eupl-Chr6 17655407 17657839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01080 1 249 bZIP Transcription Factor Family AT3G58120 56.655 3.78e-94 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl06g01080 bZIP_1 1.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01080 - - ming:122091906 482.641