Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01079 ATGAGAATGGAGCAGCAACAGAAGTATGGAGGAGGGATGTGGATGAAAGGGAAGACCATCGGTCGAGGAAGCTTCGGCACCGTTTCTTTGGCCACACTAAGACCCAACAAGCGTCGAAGAAGCCACCTTCCCCCTCTAATGGCCGTCAAGTCTGCGGAGGTCTCTCAATCAGCTTCGCTTCAGAAAGAAAGAGAATCTCTCAGCAACCTTCAAGGATGCCCCAACGTCCTTAGCTGCTTTGGGGACGAGGTCACCACCGACAACAATGGTCAGATGATCTACAATGTGTTGTTGGAGTACGCTTCCGGAGGCAGCTTAGCCCAACAGATTAAGAATTCGAGTGGTGGGCTACCTGAATCAGATATTAGGCGGTACACCAGGTCGATTCTTCGTGGGCTCAACCATATTCATGGTTGCGGCTACGTTCACTGCGACATCAAACCCCACAATATCCTACTCGTGTCTTCGACGACGACGTCGAGTTCTACATTCGCTGCGAAGATTGCTGATTTCGGATGTGCGAAGAGGGCTAAGAATATGAAGAAGAGAAAGATGGAGAGGCCCTGCTTGAGAGGCACTCCTCTGTATATGTCACCGGAAGCTGTCGCCGATTATATACAGGAGCCTCCCTCGGATATATGGTCTCTTGGGTGCGTTGTGGCAGAGATGGTAAGTGGGAAGCCGGCCTGGAGTTGCGAACCAGACATGGACGTCGATGATCTTCTTGTTAGAATTGTTTCTCCCCGAGAATTGCCAGAAACCCCAAGTAAGATGTCGAAAGAGGGGAAAGATTTCCTGAAGAGATGTTTCGTGAGGACTAGTATGTATAGGTGGACTGCTGAGATGCTCTTGAATCACCCTTTTGTGGCAATGGATGATACGGATTCGGAAGAAGTAGAGGAGGTTGCTTCTGCAACAGCAACTGGGGTGATTTCATTGACACCGTCGAATTCTTTGACGGATTGCATCTTGCAGTTGGAGACAGGGACACAGCCCAATTTACCCTCTTCTTCAGACGATTCGGTAATTCTGTCTCAAGAAGGTTCCTCTGCTTCTAATCAGTCAGGAGAGGTAAAGGAAATGAAGGTTCAAGTGGTTGGAAACTCTGCAGAAGAAGTGACAATGGGAGATCAAAAAAGGAGGAAGATTACAAGCTCTACTATTACTGAGGATGATGACACCGTCGAGTGTGACTGTTCAAGCAGAAAATTTGAAGCAGCATCTCGGTATATGGTCGCCATATTGTGA 1248 0.484 MRMEQQQKYGGGMWMKGKTIGRGSFGTVSLATLRPNKRRRSHLPPLMAVKSAEVSQSASLQKERESLSNLQGCPNVLSCFGDEVTTDNNGQMIYNVLLEYASGGSLAQQIKNSSGGLPESDIRRYTRSILRGLNHIHGCGYVHCDIKPHNILLVSSTTTSSSTFAAKIADFGCAKRAKNMKKRKMERPCLRGTPLYMSPEAVADYIQEPPSDIWSLGCVVAEMVSGKPAWSCEPDMDVDDLLVRIVSPRELPETPSKMSKEGKDFLKRCFVRTSMYRWTAEMLLNHPFVAMDDTDSEEVEEVASATATGVISLTPSNSLTDCILQLETGTQPNLPSSSDDSVILSQEGSSASNQSGEVKEMKVQVVGNSAEEVTMGDQKRRKITSSTITEDDDTVECDCSSRKFEAASRYMVAIL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01079 415 Pfam Protein kinase domain 16 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01079 415 CDD STKc_MAPKKK 14 289 - -
Eupl06g01079 415 SMART serkin_6 14 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01079 415 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 9 347 - -
Eupl06g01079 415 ProSiteProfiles Protein kinase domain profile. 14 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01079 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Eupl06g01079 415 Gene3D Transferase(Phosphotransferase) domain 1 11 334 - -
Eupl06g01079 415 MobiDBLite consensus disorder prediction 330 362 - -
Eupl06g01079 415 SUPERFAMILY Protein kinase-like (PK-like) 12 320 IPR011009 -
Eupl06g01079 415 ProSitePatterns Protein kinases ATP-binding region signature. 20 50 IPR017441 GO:0005524
Eupl06g01079 415 MobiDBLite consensus disorder prediction 330 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01079 Eupl-Chr6 17643343 17644939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01079 14 300 MAP Kinase Kinase Kinase AT4G36950 50.172 7.76e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl06g01079 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01079 - - ming:122071989 406.371