Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01078 ATGGCAGTGAAGTCGACTGATGTCTCTTTATCACATTCATGTCAGAATGAGAGAGAGATACTGACCAACCTCGAAGGTTGTCCGTACATTCTTCACTGCAATGGAGACAATGTTACCATCAAGAACAGTCAGTCAATCTACAATATGTTCTTGGAGTACGCCTCTGTAGGAACCTTAGTTGATCGAATTAAGAGTTCTCGCGGTGGAATACCCGAATCACAAGTTAAGCGCTACACCCAGTCGATTCTCCAAGGGCTTAACCACATTTACCAATGTGGTTATGTACATTGCGATATCAAGCCTCAAAATATCTTACTCGTTCCATCCTCTTCGAAGCGTAAGACCAACATAGTGAAGAATGACGATTTTGGGCTTGCAAAGAAAATTGGCCAACATAAGGAGAAAGACACGGTTTTCTTGAAGGGTACCCCTTTGTACATTGCACCGGAATCGGTTGTTTATAATGAATACGAGCCTCCCTCTGATGTATGGACTCTTAGGTATGCTGTAGTAGAGATGTTGAGTGGAGAACCAACTTGGAAGTGTGCACCGAACACTGCAATATATGCTCTCTTGTTTCAGATCGGTTGCAGCGGGAACTTGCCTGTGATACCAAGAAATTTGTCGAAAGAAGCGCAGGACTTTGTGAAGAGATGTAGTTATGATGGACACCCGATATGCTCTTGA 687 0.4338 MAVKSTDVSLSHSCQNEREILTNLEGCPYILHCNGDNVTIKNSQSIYNMFLEYASVGTLVDRIKSSRGGIPESQVKRYTQSILQGLNHIYQCGYVHCDIKPQNILLVPSSSKRKTNIVKNDDFGLAKKIGQHKEKDTVFLKGTPLYIAPESVVYNEYEPPSDVWTLRYAVVEMLSGEPTWKCAPNTAIYALLFQIGCSGNLPVIPRNLSKEAQDFVKRCSYDGHPICS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01078 228 SUPERFAMILY Protein kinase-like (PK-like) 8 219 IPR011009 -
Eupl06g01078 228 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 219 - -
Eupl06g01078 228 SMART serkin_6 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01078 228 Gene3D Transferase(Phosphotransferase) domain 1 1 221 - -
Eupl06g01078 228 ProSitePatterns Serine/Threonine protein kinases active-site signature. 94 106 IPR008271 GO:0004672|GO:0006468
Eupl06g01078 228 Pfam Protein kinase domain 8 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01078 228 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01078 Eupl-Chr6 17636451 17637137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01078 1 219 MAP Kinase Kinase Kinase AT4G36950 45.495 4.11e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl06g01078 Pkinase 8.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01078 - - nnu:104609171 252.677