Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01072 ATGCAGAATCATAGAGGTTTATGGATGAGAGGGAAGATCATTGGATCAGGCAGCTTCGGCACCGTTTCTCTAGCCACAACCCACAACAAACGTCGTCGTCGAAGTTATCTCCCCCCTGTAATAGCCGTGAAATCAGCCGACGTCGAGCTATCAAAATCCCTTCTGAAGGAGAAACAGATCCTCACTGACCTCCAAGACTGTCCGTACATTATTCGTTGCTACGGAGACGATATCACCATTGAGAAGAACAACCAATCTACCTACAATCTGTTATTGGAATCAATTCTTGAAGGGCTTAACCACATTCATCAACGTGGTTATGTACACTGCGATATCAAGCCTCACAACATCCTACTCGTCGAATCTCCATCATCCTCATTGGATTATGTAGCGAAACTTGCTGATTTCGGGACTTCGAAGCAAGTGGGCCCAGAGAAGAAAAGAGACAGGGTCCGTTTGAAGGGTACCCCTCTGTATATAGCACCTGAGTCGGTAGCCTGTAATGAATACGCGCCTCACTCGGATGTATGGGCTCTTGGGTGTGCCGTAGTTGAGATGCTGACCGGTGAACCAGCTTGGAAATGTAAACCGGGTGCCGAGTTGTATAGTTTCTTGTTTCGGATTGCTTGTACCGAGGAATTGCCTGTAATATCAGGACAGATGTCGAAAGAGGCGCAGGATTTCGTGAAGAAGTGCTTGGTAAGGGATACGATGTTTCGGTGGACACCTGCTATGCTCTTGAGACATCCCTTTCGCGCCGTCAATGAAGACGTGGTCGAAGAAGAAGAAGGGTTTGATTTCTGTAAACCTAGTTTTGTTCAGAAAAGAGAGTTCCCGGGAAAGAGAAAGAGGAGGACGGATGAGGTGGAGGAGGTGGCGGAGTGGCCTTCTTCATTAGGCACTGTGAGAGTAGGACCGAATGATTTGGTACGATACTGGTGTATCAGGAGATATGCAGCAGCGGCTCCATCAATCGATGATGTGCTGTGGATATAG 996 0.4769 MQNHRGLWMRGKIIGSGSFGTVSLATTHNKRRRRSYLPPVIAVKSADVELSKSLLKEKQILTDLQDCPYIIRCYGDDITIEKNNQSTYNLLLESILEGLNHIHQRGYVHCDIKPHNILLVESPSSSLDYVAKLADFGTSKQVGPEKKRDRVRLKGTPLYIAPESVACNEYAPHSDVWALGCAVVEMLTGEPAWKCKPGAELYSFLFRIACTEELPVISGQMSKEAQDFVKKCLVRDTMFRWTPAMLLRHPFRAVNEDVVEEEEGFDFCKPSFVQKREFPGKRKRRTDEVEEVAEWPSSLGTVRVGPNDLVRYWCIRRYAAAAPSIDDVLWI* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01072 331 ProSitePatterns Protein kinases ATP-binding region signature. 14 44 IPR017441 GO:0005524
Eupl06g01072 331 ProSiteProfiles Protein kinase domain profile. 8 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01072 331 Gene3D Transferase(Phosphotransferase) domain 1 83 294 - -
Eupl06g01072 331 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 7 93 - -
Eupl06g01072 331 Gene3D Phosphorylase Kinase; domain 1 7 82 - -
Eupl06g01072 331 Pfam Protein kinase domain 87 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01072 331 SMART serkin_6 8 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01072 331 SUPERFAMILY Protein kinase-like (PK-like) 7 253 IPR011009 -
Eupl06g01072 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 107 119 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01072 Eupl-Chr6 17542290 17543369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01072 8 265 MAP Kinase Kinase Kinase AT5G67080 42.955 1.65e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl06g01072 Pkinase 1.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01072 - - ming:122076412 276.174