Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01071 ATGGAAACAGAGATGCAGAATCATAGAGGTTTATGGATGAGAGGGAAGATCATTGGATCAGGCAGCTTCGGCACCGTTTCTCTAGCCACAACCCACAACAAACTTCGTCATCGAAGCTACCTCCCCCCTGTAATAGCCGTGAAATCAGCCGACGTCGAGCTATCAAAATCCCTTCTGAAGGAGAAACATGTCCTCACTGACCTCCAAGACTGTCCGTACATTATTCGTTGCTACGGAGACGATATCACCATTGAGAAGAACAACCAATCTACCTACAATCTGTTATTGGAGTACGCCTCAGGAGGCTCCTTAGCCAATCGAATCAAGAATTCCGTCCACGGATTACCAGAATCGGAAGTTAAGTGCTACACCAGATCAATTCTTGAAGGGCTTAACCACATTCATCAACGTGGTTATGTACATTGCGATATCAAGCCTCACAACATCCTACTCGTCGAATCTCCATCATCCTCTTCGGATTATGTAGCGAAACTTGCTGATTTCGGGACTTCGAAGCAAGTGGGCCCAGAGAAGAAAAGAGACAGAGTCCGTTTGAAGGGTACCCCTCTGTATATAGCACCTGAGTCGGTAGCCTGTAATGAATACGCGCCTCACTCGGATGTATGGGCTCTTGGGTGTGCCGTAGTTGAGATGCTGACCGGTGAACCAGCTTGGAAATGTAAACCGGGTGCCGAGTTGTATAGTCTCTTGTTTCGGATTGCTTGTACCGAGGAAGTGCCTGTAATATCAGGACAGATGTCGAATGAGGCGCAGGATTTCGTGAAGAAGTGCTTGGTAAGGGATACGATGTTTCGGTGGACACCTGCTATGCTCTTGGGACATCCCTTTCTCGCCGTCAATGAAGACGTGGTCGAAGAAGAAGAAGGGTTTGATTTCTGTAAACCTAGTTTTGTTCAGAAAAGAGAGTTCCCGGGAAAGAGAAAGAGGAGGACAGATGAGGTGGAGGAGGTGGCGGAGTGGCCTTCTTCATTAGGCACTGTGAGAGTAGGACCGAATGATTTGGTACGTTACTGGTGTATCAGGAGATATGCAGCAGCGGCTCCATCAATCGATGATGTGCTGTGGATATAG 1092 0.478 METEMQNHRGLWMRGKIIGSGSFGTVSLATTHNKLRHRSYLPPVIAVKSADVELSKSLLKEKHVLTDLQDCPYIIRCYGDDITIEKNNQSTYNLLLEYASGGSLANRIKNSVHGLPESEVKCYTRSILEGLNHIHQRGYVHCDIKPHNILLVESPSSSSDYVAKLADFGTSKQVGPEKKRDRVRLKGTPLYIAPESVACNEYAPHSDVWALGCAVVEMLTGEPAWKCKPGAELYSLLFRIACTEEVPVISGQMSNEAQDFVKKCLVRDTMFRWTPAMLLGHPFLAVNEDVVEEEEGFDFCKPSFVQKREFPGKRKRRTDEVEEVAEWPSSLGTVRVGPNDLVRYWCIRRYAAAAPSIDDVLWI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01071 363 Gene3D Transferase(Phosphotransferase) domain 1 106 326 - -
Eupl06g01071 363 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 10 303 - -
Eupl06g01071 363 CDD STKc_MAPKKK 12 284 - -
Eupl06g01071 363 ProSiteProfiles Protein kinase domain profile. 12 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01071 363 ProSitePatterns Protein kinases ATP-binding region signature. 18 48 IPR017441 GO:0005524
Eupl06g01071 363 Gene3D Phosphorylase Kinase; domain 1 5 105 - -
Eupl06g01071 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Eupl06g01071 363 SUPERFAMILY Protein kinase-like (PK-like) 9 290 IPR011009 -
Eupl06g01071 363 Pfam Protein kinase domain 14 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01071 363 SMART serkin_6 12 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01071 Eupl-Chr6 17530683 17531895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01071 12 297 MAP Kinase Kinase Kinase AT5G67080 48.454 2.31e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl06g01071 Pkinase 3.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01071 - - tss:122660536 327.405