Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01070 ATGTGTAAAGAGCAGCAACAGAATCATGGAGGTGGGATGTGGACGATAGGGAAGAACATTGGCCGAGGAAGGTTTAGCACTGTTTCTTTGGCCACCCCAAGAATCAACAAGCGTCGAAGAACCCACCTCCCTCCTCTAATGGTCGTCAAGTCTGTAGGGGTCTCTCTATCAGCTTCGCTTCAAAAGGAGAGATTTATACTCAGCAACCTTCAAACATGCCCTAACATCCTTCGCTGCTACGGGGAAGAGATCACCACCGACAATAACGGTCAGATCATCTACAATGTGTTGTTGGAGTATGCCTCTGGAGGAACCCTAGCTGACCAGATTAAGAATTCTAGTGGTGGACTACCTGAATCCACTGTTAGAAGCTACACCAGGTCGATTCTTAGCGGACTCAACCACATTCACCGCAGCAGGTACATTCACTGCAATATCAAGCCTCGCAATATCTTACTCATACCATCGAAGGGGAAGACGAGCTCTGACTTCGTTGCGAAGATTGCTGACTTTGGATATGCGAAGAAGATCGAAGAGAAGATGAAAAAGAAGTGGAAGATGCAGGGCACCTGCTTGAGAGGCACTCCTCGGTATATGTCGCCGGAATATGTCACCGATTACATACAGGAACCCCCCTTGGATATATGGTCTCTTGGGTGCGTTGTGGCAGAGATGGTAAGTGGGAAACCAGCATGGAGATGTGAACCAGGCACAGATGTCAACGATCTTCTTGTTAGGATTGCTTCCGGACGGGAGTTGCCTGAAATCCCAAGTGAGATGTCGAAAGAGGGAAAGGATTTCCTGAAGAGATGTTTCGTGAGGAATAGTATGTTTAGGTGGACTGCTGAGATGCTCTTGCATCATCCTTTTGTAGCAGCAGACGGCATGATTGCATCGACACCAACAGATTCCGCAGCTGATGGCATCTCGCAGTTGGAGACATGGACACAGGCCAATGTGTCCCCCTTTCCAAATGTTTTGTCGTTCTGA 990 0.4818 MCKEQQQNHGGGMWTIGKNIGRGRFSTVSLATPRINKRRRTHLPPLMVVKSVGVSLSASLQKERFILSNLQTCPNILRCYGEEITTDNNGQIIYNVLLEYASGGTLADQIKNSSGGLPESTVRSYTRSILSGLNHIHRSRYIHCNIKPRNILLIPSKGKTSSDFVAKIADFGYAKKIEEKMKKKWKMQGTCLRGTPRYMSPEYVTDYIQEPPLDIWSLGCVVAEMVSGKPAWRCEPGTDVNDLLVRIASGRELPEIPSEMSKEGKDFLKRCFVRNSMFRWTAEMLLHHPFVAADGMIASTPTDSAADGISQLETWTQANVSPFPNVLSF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01070 329 Pfam Protein kinase domain 15 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01070 329 Gene3D Transferase(Phosphotransferase) domain 1 5 321 - -
Eupl06g01070 329 SUPERFAMILY Protein kinase-like (PK-like) 12 305 IPR011009 -
Eupl06g01070 329 ProSiteProfiles Protein kinase domain profile. 14 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01070 329 ProSitePatterns Protein kinases ATP-binding region signature. 20 50 IPR017441 GO:0005524
Eupl06g01070 329 CDD STKc_MAPKKK 14 291 - -
Eupl06g01070 329 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 7 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01070 Eupl-Chr6 17527946 17529332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01070 14 294 MAP Kinase Kinase Kinase AT4G36950 50.530 1.16e-86 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl06g01070 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01070 - - tss:122660536 370.933