Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01064 ATGGCCTCATCTAACAGACACTGGCCTAGCATGTTCAAGTCCAAGCCCTGCAACAATCACCACCAATGGCAGCATGACATCAATCCATCTCTCATGCCATCATGCCAGAGACCCCCATACACATCAGTGCCCGGTTGTGAAGAGCGGAGCCCGGAGCCAAAACCTAGGTGGAACCCTAAACCTGAGCAGATACGAATACTTGAAGCGATATTCAACTCTGGTATGGTGAATCCTCCAAGAGACGAGATAAGGAAGATAAGAGCTCAATTACAAGAATACGGTCAAGTTGGTGATGCCAACGTCTTCTACTGGTTCCAAAACAGGAAATCAAGAAGCAAACACAAGCAGCGACATCTCCAGACTGCAAAATCACAAGCCCAATCCCCTCCAGTAGTAGCTGCTGCTGCACCCTCATCATCTTCATCATCATCGTCTGAGAAATCTTCTCCAAGAACCGATAAGATGTTAGCAATGGGTGGGGTCAATGTGATCGACGTATCGAACTCTCCTACTGCTTCTGTTAATCAGACCTATTTCCAGACTCAGGGGAACTTCTCGCCTGAACCCTTTTTCTTTCCGGTGCAACAGACCGGAAGCAGTGCTGTGTTTTCGCAGGGATTTTGCTTCTCCGAACTATCCAATGTCGTTCAGATCCCTGATCAATTGGTGGGACCTTGCTCAGGGCTTCCACTAGGTGAACTATTCAATCAAGGAGCTTCAAAAGAGAAGTTCAAGTTGGAGCAGCAACTGAGCTACACTACTACTAACACTATCCCTTCTTCTACTACAACGACTGCTTCTACTGCTATCAATCAAATTCAAGACGTTGGCGAATCCGGTGTAATGGGTACGGTAGCTGCGGCGAAGTCGACGGTGTTCATAAACGACGTGGCATTCGAGGTAGGTGTAGGGCCCCTTAACGTGCGCGAGGCTTTTGGAGATGACGCCGTACTCATCCACTCTTCTGGTCAGCCCGTCCTCACCAATGAATGGGGTGTCACCCTCCAATCTCTCCAACCCGGCGCATTCTATTATCTGGTGTAG 1044 0.4875 MASSNRHWPSMFKSKPCNNHHQWQHDINPSLMPSCQRPPYTSVPGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKQRHLQTAKSQAQSPPVVAAAAPSSSSSSSSEKSSPRTDKMLAMGGVNVIDVSNSPTASVNQTYFQTQGNFSPEPFFFPVQQTGSSAVFSQGFCFSELSNVVQIPDQLVGPCSGLPLGELFNQGASKEKFKLEQQLSYTTTNTIPSSTTTTASTAINQIQDVGESGVMGTVAAAKSTVFINDVAFEVGVGPLNVREAFGDDAVLIHSSGQPVLTNEWGVTLQSLQPGAFYYLV* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01064 347 MobiDBLite consensus disorder prediction 19 60 - -
Eupl06g01064 347 SMART HOX_1 52 119 IPR001356 GO:0003677
Eupl06g01064 347 Pfam Homeodomain 54 114 IPR001356 GO:0003677
Eupl06g01064 347 SUPERFAMILY Homeodomain-like 49 120 IPR009057 -
Eupl06g01064 347 Gene3D - 54 120 - -
Eupl06g01064 347 ProSiteProfiles 'Homeobox' domain profile. 50 115 IPR001356 GO:0003677
Eupl06g01064 347 MobiDBLite consensus disorder prediction 113 153 - -
Eupl06g01064 347 FunFam WUSCHEL-related homeobox 11 54 121 - -
Eupl06g01064 347 MobiDBLite consensus disorder prediction 121 151 - -
Eupl06g01064 347 CDD homeodomain 53 116 IPR001356 GO:0003677
Eupl06g01064 347 MobiDBLite consensus disorder prediction 19 37 - -
Eupl06g01064 347 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 347 IPR044557 GO:0003700|GO:0050793
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01064 Eupl-Chr6 17449868 17452534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01064 1 347 Wox Gene Family AT2G33880 45.685 1.19e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Eupl06g01064 Homeodomain 9.9e-15 CL0123