Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01062 ATGCAGAAGAAAAATGGGTCCGCAGTGCATCAAGCATGCGCAGCATGCAAGCATCAGAGGAAGAAGTGCTCTCAAGATTGTGTATTGGCTCCCTTCTTTCCTCCAGAGAAAAGCTCACAGTTCCAAGTGGTGCACAAGGTATTCGGTGTAAGCAATATTTCAAAGCTAGTAAAGAATCTACGGAACTACAATGAACGCGTCAAGGCTATCAATACGCTTGTATGGGAAGCACAATGGTGGCAAGCCGATCCAGTTCTCGGATGTTATGGGGAGTATAAGAAGAAAGTTGAGGAGCTTAAGTTGCTCCGAGAGACTATGAAGTACAAACCTGGTTTGATAGGATGGAACAATACTAACGGAATCGGTGTCGGTGTCGGTGTCGGGGTTCATTATAATAATACTATCAATTTCATAAGTAGCAATGGAAACTTGATATTAGAATCAACTCCCTGTAGCCATGCTTCTCATGAACAAGGACAGGAAAAAGATCATAGCGCAGTTTGCCCACCACATTCAGTTGATAGTCTTGATCAGCATTACTATCTTCCAGATCAATACGGTCGGGAGAACGTAGAGATGGACGCAACAATTTGGGATGGACGATCATAG 609 0.4368 MQKKNGSAVHQACAACKHQRKKCSQDCVLAPFFPPEKSSQFQVVHKVFGVSNISKLVKNLRNYNERVKAINTLVWEAQWWQADPVLGCYGEYKKKVEELKLLRETMKYKPGLIGWNNTNGIGVGVGVGVHYNNTINFISSNGNLILESTPCSHASHEQGQEKDHSAVCPPHSVDSLDQHYYLPDQYGRENVEMDATIWDGRS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01062 202 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
Eupl06g01062 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 105 - -
Eupl06g01062 202 Pfam Lateral organ boundaries (LOB) domain 12 107 IPR004883 -
Eupl06g01062 202 Coils Coil 53 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01062 Eupl-Chr6 17399353 17400189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01062 10 121 AS2 family AT1G06280 54.464 5.15e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl06g01062 LOB 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01062 - - ming:122092956 191.43