Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01061 ATGGCTATCGAACTGGAGCACTGTGCAGCACCTGATGCACTCCTAGAGAATGTGTGGACCAGCTTCATTGCAGGAACTGCATCGGGCAGAGGAACGGGCAATACACCTAACTCGTCCCAAAATTGGGATGAGTTGCCTAGTCTTGATGGGAGAGATGGGTCAATGGAACTTCTACAGAGGCTCCCAAGTCTTGGGAGATGGATATCTATGGGCACCGAGAACTGGGAGGAACTGCTCGACGGAATAATACCTGCAATCAATAATGAACCATCTGGTAATCTTGAACCAGAATTCAGCGGGGCCAGTTCAGCCTCAAAATCAAACTCCGTGAAAGTGGAAAAGGTGATTACCCGACACTTCAGGGGGGTGAGGAGGCGGCCATGGGGGAAGTTCGCAGCAGAGATAAGGGACTCATCAAGGAAAGGTGCTCGAGTTTGGCTTGGGACCTTCAATACAGCTGAAGAAGCTGCCTTGGCTTATGACAAAGCTGCTTTAAAGATGAGAGGGCCTCGGACTTTCCTCAATTTCCCACTGGAGATGGTTGCTGAGGCTTTGGAAGATATTCATTCAGAACAGGATTTGAATTGCACCTCTACATCTCCTCAAGCAAGTTATACTACAAAACTCAATAACTCTTTCAGCTCATTTACCAAGTGCACTGAGACATCTCATAATCCTCGAAAAAGAGCAGCACGTGAATGGGACCCGAATGAGGAGATGATTATTGAACCACCTACATGGAAGCGACTGGCTACTTTGGACGAGATCTTTGGGAACGGTAGTGACGTGCTGGAGTTTCAGGACCTTGGGAGTGATTACTTGGACAGTTTGCTGTCTTCTCTGTAG 846 0.4811 MAIELEHCAAPDALLENVWTSFIAGTASGRGTGNTPNSSQNWDELPSLDGRDGSMELLQRLPSLGRWISMGTENWEELLDGIIPAINNEPSGNLEPEFSGASSASKSNSVKVEKVITRHFRGVRRRPWGKFAAEIRDSSRKGARVWLGTFNTAEEAALAYDKAALKMRGPRTFLNFPLEMVAEALEDIHSEQDLNCTSTSPQASYTTKLNNSFSSFTKCTETSHNPRKRAAREWDPNEEMIIEPPTWKRLATLDEIFGNGSDVLEFQDLGSDYLDSLLSSL* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01061 281 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Eupl06g01061 281 PRINTS Ethylene responsive element binding protein signature 120 131 IPR001471 GO:0003700|GO:0006355
Eupl06g01061 281 FunFam Ethylene-responsive transcription factor 2 118 179 - -
Eupl06g01061 281 SUPERFAMILY DNA-binding domain 119 179 IPR016177 GO:0003677
Eupl06g01061 281 SMART rav1_2 119 183 IPR001471 GO:0003700|GO:0006355
Eupl06g01061 281 ProSiteProfiles AP2/ERF domain profile. 119 177 IPR001471 GO:0003700|GO:0006355
Eupl06g01061 281 CDD AP2 119 177 IPR001471 GO:0003700|GO:0006355
Eupl06g01061 281 PANTHER DNA-BINDING DOMAIN 103 220 IPR044808 GO:0003700|GO:0009873
Eupl06g01061 281 Gene3D AP2/ERF domain 118 179 IPR036955 GO:0003700|GO:0006355
Eupl06g01061 281 Pfam AP2 domain 119 169 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01061 Eupl-Chr6 17368439 17369671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01061 14 281 AP2-EREBP Transcription Factor Family AT4G18450 35.526 4.38e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Eupl06g01061 AP2 5.3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01061 - - nnu:104599517 353.214