Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01057 ATGACTTCCATGGACGAATCACACCAACTTATAGGTCCAGATTCAGAATCAGGAACATCTGATCGGAGACCTGGCTATGTTCTTGTAATTGGAGCTACAAATAGACCTGATGCTGTAGACGCGGCCCTAAGGAGGCCTGGGCGATTTGATCGTGAGATTGTTTTGGGTGTTCCAGATGAAAATGCACGAGTTGAGATCCTGTCTGTGCTGACTCGTAATCTTAGACTTGAGGGTACATTTGATCTTGACAAAATAGCCAGGTCTACACCAGGATTTGTTGGAGCTGACTTGGCAGCACTGGCTAACAAGGCTGGTAACCTTGCAATGAAGAGAATTATAGACACAAGGAAGTCTGAGCTATTTAAATTCCCTAAGGATGAGGAGAACGATGAAGAATGGTGGCGGCACCCATGGGTACCTGAAGAAATGGAAAGACTTAGCATCACTATGGCCGATTTTGAGGAGGCAGCTAAGATGGTTCAACCTTCTTCAAGAAGAGAAGGATTTTCAGCAATTCCTAATGTTAAGTGGGAAGATGTTGGAGGGCTTGATTTGTTGAGGAAGGAATTTGACCGTTATATTGTTAGCCGTATAAAACACCCTGAGGATTACGCGGAATTTGGAGTGGATTTGGAGACAGGTTTTTTGCTTTACGGACCTCCAGGTTGTGGTAAAACACTGATTGCCAAGGCTGTGGCAAACGAAGCTGGAGCCAATTTCATACACATTAAGGGCCCTGAACTTCTCAACAAGTATGTTGGAGAAAGTGAATTGGCAGTTCGGACAATCTTTAGTCGTGCCCGGACGTGTTCACCATGTATACTTTTCTTTGATGAGGTGGACGCTTTAACAACGAAACGTGGAAAAGAAGGGGGATGGGTCGTTGCGCGGCTTCTGAACCAGCTACTCATAGAGCTAGATGGTGCAGATCAGCGGCGGGGTGTTTTTGTCATTGGTGCCACAAACAGACCTGAGGTGATGGACCGTGCTGTCTTACGGCCAGGCAGGTTCGGGAAACTCTTGTATATCCCTTTGCCTGGTCCGGATGAACGCGGATTGATTTTAAAAGCTCTTGCTCGGAAGAAACCTATTGGTACCGATGTGGATTTGATTGCTATTTGGCGGAAGGAGGCGTGTGAAAATCTAAGTGGAGCCGATCTTGCTGCGGTGATGAATGAAGCTGCCATGGCTGCCCTGGAAGAGAAACAGATCTTAGGCCAGAGTAGTTCAGATAGGAAAACATGGACTATCAAGGCAACACACTTCGACCGAGCATTGGAGAAGATTTCTCCATCTGTCTCAGACAAGCAAAAGAGCAACTATGAGTTTTTGTCGCGGAGCTTTAGAGCAGCATGA 1356 0.4639 MTSMDESHQLIGPDSESGTSDRRPGYVLVIGATNRPDAVDAALRRPGRFDREIVLGVPDENARVEILSVLTRNLRLEGTFDLDKIARSTPGFVGADLAALANKAGNLAMKRIIDTRKSELFKFPKDEENDEEWWRHPWVPEEMERLSITMADFEEAAKMVQPSSRREGFSAIPNVKWEDVGGLDLLRKEFDRYIVSRIKHPEDYAEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTIFSRARTCSPCILFFDEVDALTTKRGKEGGWVVARLLNQLLIELDGADQRRGVFVIGATNRPEVMDRAVLRPGRFGKLLYIPLPGPDERGLILKALARKKPIGTDVDLIAIWRKEACENLSGADLAAVMNEAAMAALEEKQILGQSSSDRKTWTIKATHFDRALEKISPSVSDKQKSNYEFLSRSFRAA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01057 451 Gene3D - 2 58 IPR027417 -
Eupl06g01057 451 Pfam AAA+ lid domain 80 115 IPR041569 -
Eupl06g01057 451 Pfam AAA+ lid domain 369 411 IPR041569 -
Eupl06g01057 451 FunFam ATPase, AAA family protein 173 350 - -
Eupl06g01057 451 Gene3D - 59 167 - -
Eupl06g01057 451 FunFam Cell division control protein 48 homolog C 58 167 - -
Eupl06g01057 451 ProSitePatterns AAA-protein family signature. 27 45 IPR003960 GO:0005524|GO:0016887
Eupl06g01057 451 Pfam ATPase family associated with various cellular activities (AAA) 25 55 IPR003959 GO:0005524|GO:0016887
Eupl06g01057 451 Pfam ATPase family associated with various cellular activities (AAA) 216 344 IPR003959 GO:0005524|GO:0016887
Eupl06g01057 451 Gene3D - 346 427 - -
Eupl06g01057 451 MobiDBLite consensus disorder prediction 1 16 - -
Eupl06g01057 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 163 IPR027417 -
Eupl06g01057 451 SMART AAA_5 211 347 IPR003593 GO:0016887
Eupl06g01057 451 ProSitePatterns AAA-protein family signature. 315 333 IPR003960 GO:0005524|GO:0016887
Eupl06g01057 451 MobiDBLite consensus disorder prediction 1 23 - -
Eupl06g01057 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 446 IPR027417 -
Eupl06g01057 451 Gene3D - 173 442 IPR027417 -
Eupl06g01057 451 PANTHER AAA-FAMILY ATPASE 2 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01057 Eupl-Chr6 17330330 17336670 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01057 27 449 Calmodulin-binding Proteins AT3G56690 37.736 3.47e-89 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01057 K14571 - nnu:104593610 763.066