Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01038 ATGGAATGGCTAGACATACCTAGTCCTAACCTTCCTCCAGGGTTCAGGTTCCATCCCACAGATCAAGAGCTAATTATCCATTATTTGAAGAAAAAGGTCTCATCTTCCCCGACTCCAATAGTCTCTATAATAGCAGACATCGATCTCTACAAGTTCAATCCATGGGAACTCCCTGGTAAGGCTTTCTTTGGAGAGGGTGAATGGTTCTTCTTCAGCCCAAGGGATCGAAAGTATCCGAATGGAGCTCGCCCGAACAGGGCAGCAGCATCTGGTTACTGGAAAGCTACTGGAACAGACAAACCTATCCTCACCTCTAGCGGGTCACAGTGTCTTGGTGTGAAGAAAGCTCTAGTCTTTTACACAGGTCGTCCTCCCAAAGGTATGAAAACTGACTGGGTGATGCACGAATACAGGGTTCTCGATGATGCATCTCGATCCCCAAAGCTCAAGGGATCCATGCGTTTGGATGATTGGGTTCTATGCCGAGTTCGCCGGAAGAGCATCGTCCCACCCCAAATTGGAGAGAAACATGATCAGAGCCTGTTTAGTGGCTCCCCTCCACTTGGTCACCAATGCTTGGAGCAGCAGGTGATGAGGAAGAGGAGTGATGATCTATTTGAAGAAAGGGAGTATCAGTTTCAAGATTATCTCATGGGGTCCCCAGTATATAGTTGTGCAGACCAAAACATAAGCTTCCAAGGGATCCCGCCAATACCCTCAACTTCAGACATGGCTTGTCAGTCGTCTCAAGCCCCTCTGGTTTCTTCATTCCAACAAATGCTCGAATCGATAAAAAGAACACTTTCTATTGGCACTTTGGATGATGAACACATTTCGATACCACCTAGTAAGAGACTGAATAGTACTTCGAGTAACATGGAAAACATAATCATGGATGAAGATTCTTCTCCTACCGATTCAAAGTCCATCCCTCAATGCTATTCGGGTTTCATACTTTAG 960 0.4594 MEWLDIPSPNLPPGFRFHPTDQELIIHYLKKKVSSSPTPIVSIIADIDLYKFNPWELPGKAFFGEGEWFFFSPRDRKYPNGARPNRAAASGYWKATGTDKPILTSSGSQCLGVKKALVFYTGRPPKGMKTDWVMHEYRVLDDASRSPKLKGSMRLDDWVLCRVRRKSIVPPQIGEKHDQSLFSGSPPLGHQCLEQQVMRKRSDDLFEEREYQFQDYLMGSPVYSCADQNISFQGIPPIPSTSDMACQSSQAPLVSSFQQMLESIKRTLSIGTLDDEHISIPPSKRLNSTSSNMENIIMDEDSSPTDSKSIPQCYSGFIL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01038 319 PANTHER NAC TRANSCRIPTION FACTOR 56 11 184 - -
Eupl06g01038 319 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Eupl06g01038 319 FunFam NAC domain-containing protein 72-like 20 169 - -
Eupl06g01038 319 ProSiteProfiles NAC domain profile. 11 166 IPR003441 GO:0003677|GO:0006355
Eupl06g01038 319 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Eupl06g01038 319 SUPERFAMILY NAC domain 6 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01038 Eupl-Chr6 17126260 17127873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01038 9 167 NAC Transcription Factor Family AT1G61110 70.659 4.48e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl06g01038 NAM 4.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01038 - - msin:131238751 366.311